Gene Daci_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3994 
Symbol 
ID5749581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4398547 
End bp4398885 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content61% 
IMG OID641299096 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_001565010 
Protein GI160899428 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.38929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0257011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTA TCAAAATACT TCCCCACGCC GAATACTGTC CCCAGGGAGC CGAAATCGAG 
GCGCCCGCCG GAACCTCGAT CTGCGAGGCC CTGCTGGACA ACAACGTCAA GATCGAACAT
GCCTGCGACA TGAGCTGCGC ATGCACCACC TGCCATGTGG TGGTCAAGGC GGGCTACAAC
TCGCTGAACG AGGCCGAGGA AGAGGAAGAA GACCTGCTGG ACCGCGCCTG GGGCCTGCAG
CCGCAGTCCC GACTGTCCTG CCAGGCCATC CTGGCACGCG AGGACGTGAC CATCGAGATT
CCCAAGTACT CGCTCAATCA CGCCAAGGAA AACCACTGA
 
Protein sequence
MPVIKILPHA EYCPQGAEIE APAGTSICEA LLDNNVKIEH ACDMSCACTT CHVVVKAGYN 
SLNEAEEEEE DLLDRAWGLQ PQSRLSCQAI LAREDVTIEI PKYSLNHAKE NH