| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3993 |
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| Symbol | |
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| ID | 5749580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4397820 |
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| End bp | 4398536 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641299095 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001565009 |
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| Protein GI | 160899427 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0718563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0295208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGTC AAATCATTCT CGACACTGAA ACCACTGGCC TGTCAGCCGA CAACGGCGAC
CGGCTCATCG AGCTGGGCTG CGTGGAGATG GTCAACCGCA AGCTGACCGG CAACAACCTG
CATCTGTATT TCAATGCGGG GCGCGACAGC CATCCGGACG CGCTGCGCGT GCACGGCATC
ACCACCGAAT TCCTCAAGGA CAAGCCGCGC TTCGAGCACA AGGTCGATGA GATCTGGGAG
TACCTGCAGG GCGCCGAGCT CATCATCCAC AACGCGCCAT TTGACCTGGG GTTCCTGAAC
AAGGAGCTGG AGCTCGCCAA CCGCCCGCCG ATCCGCCAGT GCGTGAGCGG GGTCATCGAC
ACCCTGGTCA TGGCCAAGGA GATGTTCCCT GGCAAGCGCA ACTCGCTCGA TTCGCTATGC
GATCGCCTGG AGGTGGACAA CTCCGGGCGC ACGCTGCACG GCGCCTTGCT GGATGCGGAG
CTGCTGGCCG ATGTCTACAT CAACCTCACG CGGGGCCAGG AAGCCCTGTT GATGGCGGAA
GAGCCTGTCC AGTCCGAGGG TGGGCTGGTC GTGGCGCAGG TGGATCTGGC CAGCTTCAAG
CTGCGCGTGG TGCACGCCAA TGATCAGGAG CTGGCCGCAC ACGAGGATGT GATGGTGCAG
ATGGACAAAT CGAGCGGCGG CAAGACAATT TGGCGCGGCT TCGAAAATCG GTCCTAG
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| Protein sequence | MSRQIILDTE TTGLSADNGD RLIELGCVEM VNRKLTGNNL HLYFNAGRDS HPDALRVHGI
TTEFLKDKPR FEHKVDEIWE YLQGAELIIH NAPFDLGFLN KELELANRPP IRQCVSGVID
TLVMAKEMFP GKRNSLDSLC DRLEVDNSGR TLHGALLDAE LLADVYINLT RGQEALLMAE
EPVQSEGGLV VAQVDLASFK LRVVHANDQE LAAHEDVMVQ MDKSSGGKTI WRGFENRS
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