Gene Daci_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3983 
Symbol 
ID5749566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4388537 
End bp4389391 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID641299081 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001564999 
Protein GI160899417 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.763661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0287042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AACTCATCGA CGGCAACGCC CTCTCCCGCC AACTGCGTGC CGAAGTCGCC 
CAGCGCGCCA CCGCCCTGAA GGCCCGCGGC ACCACGCCCG GCCTGGCCGT GGTCCTGGTC
GGCGACAACC CTGCCTCCCA GGTCTATGTG CGCAACAAGG TCAAGGCCTG CGAGGACGCG
GGCTTTCATT CGGTGCTGGA GAAGTACGAT GCCTCGATGA CCGAGGCCGA ACTGCTAGCC
CGCGTCGAGG CGCTGAACAA CGACCCCAGC ATCCACGGCA TCCTGGTCCA GCTGCCGCTG
CCCGCACACA TCGACGACCA CAAGGTCATC GAGACCATTT CGCCGCTCAA GGACGTGGAT
GGCTTTCACG TGGCCAGTGC AGGCGCGCTG ATGGTGGGCG AGGTCGGCTT CAAGGCCTGC
ACCCCCTACG GCTGCATGAA GATGCTGGAA TCCATCGGCA TGAAGGACCT GCGCGGCAAG
CACGCCGTGG TCATCGGCCG CTCCAACATC GTCGGCAAGC CCATGGCCAT GATGCTGCTG
GCCGCCAATG CCACCGTGAC CATCTGCCAC AGCGGCACGG CCGATCTCGC CGCCATGACG
CGCCAGGCCG ACATCGTGGT TGCCGCCGTG GGCAAGCGCA ATGTGCTGAC TGCAGACATG
TGCAAGCCTG GCGCCGTGGT CATCGACGTG GGCATGAATC GCAACGACGA AGGCAAGCTC
TGCGGCGACG TGGACTTTGA CGGCGTCAAG GAAGTGGCCG GCTTCATCAC GCCCGTACCC
GGCGGTGTCG GCCCCATGAC GATTACCATG CTGCTGGTCA ACACCATGGA GGCGGCCGAG
CGCGCCGCCG GCTGA
 
Protein sequence
MTAQLIDGNA LSRQLRAEVA QRATALKARG TTPGLAVVLV GDNPASQVYV RNKVKACEDA 
GFHSVLEKYD ASMTEAELLA RVEALNNDPS IHGILVQLPL PAHIDDHKVI ETISPLKDVD
GFHVASAGAL MVGEVGFKAC TPYGCMKMLE SIGMKDLRGK HAVVIGRSNI VGKPMAMMLL
AANATVTICH SGTADLAAMT RQADIVVAAV GKRNVLTADM CKPGAVVIDV GMNRNDEGKL
CGDVDFDGVK EVAGFITPVP GGVGPMTITM LLVNTMEAAE RAAG