Gene Daci_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3971 
Symbol 
ID5749554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4371891 
End bp4372730 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID641299069 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001564987 
Protein GI160899405 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.503706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0610205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCTCCACCTA TGTCCCGCCT GCCGTATGGC AGCCAGCGCC TTCGGGCGGC 
ACCTTTGCTA ACATCAACCG CCCGGTCGCC GGTCCCACCC ATGACAAGGC ATTGCCGGTG
GGGCAGCAGC CGCTGCAGCT GTATTCGCTG GCCACGCCCA ACGGCGTGAA GGTCACCATC
ATGCTGGAGG AGCTGCTGGC GCTGGGCCAT GCCGGCGCGG AGTACGACGC GTGGCTGATC
CGCATCAGCG AAGGCGACCA GTTCTCCAGC GGCTTTGTCG AGGTCAATCC CAACTCCAAG
ATCCCGGCGC TGGTGGACCG CAGCGTCGAG CCGTCGGTGC GCGTGTTCGA GTCAGGCTCC
ATCTTGCTGT ACCTGGCCGA GAAGTTTGGT GCGCTGCTGC CTGCCGAGCC CGCTGCGCGC
ACCGAAACCC TGAACTGGCT GTTCTGGCAG ATGGGGTCGG CACCTTACCT TGGCGGCGGT
TTCGGGCATT TCTATGCCTA TGCGCCCGAG AAGTTCGAGT ACCCCATCAA CCGCTTCACC
ATGGAGACCA AGCGCCAGCT CGATGTGCTC GATCGCCAGC TGGCCCTGCA CCCGTTCATT
GCAGGGGCGA ACTACAGCAT TGCCGATATC GCCATCTGGC CCTGGTATGG GGCCCTGGTG
CTCAACGAGG TGTATGGCGC GGCCGAGTTC CTGTCTGCCC ATGAATACAC GCATGTCATG
CGCTGGGCCA GGGAGATTGC CCAAAGGCCG GCCGTGCTGC GGGGCCGCCG CGTGAATCGT
ACCTGGGGAG ATGAAGCCAC CCAGGTGCCC GAGCGCCATC AGGCGTCGGA CCTGGGCTGA
 
Protein sequence
MTDSSTYVPP AVWQPAPSGG TFANINRPVA GPTHDKALPV GQQPLQLYSL ATPNGVKVTI 
MLEELLALGH AGAEYDAWLI RISEGDQFSS GFVEVNPNSK IPALVDRSVE PSVRVFESGS
ILLYLAEKFG ALLPAEPAAR TETLNWLFWQ MGSAPYLGGG FGHFYAYAPE KFEYPINRFT
METKRQLDVL DRQLALHPFI AGANYSIADI AIWPWYGALV LNEVYGAAEF LSAHEYTHVM
RWAREIAQRP AVLRGRRVNR TWGDEATQVP ERHQASDLG