Gene Daci_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3943 
Symbol 
ID5749526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4342851 
End bp4343423 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content70% 
IMG OID641299041 
Producthypothetical protein 
Protein accessionYP_001564959 
Protein GI160899377 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00148213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.123195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAG ACTTCAAAGG CCGCCCCTGC GTGCTCATCC TTGCTTCGGG TCGTGGCGAG 
CGTTTCCGTG CCTCGGGCGG CACCATGCAC AAGCTGTCCG CACCGCTGGG CGGCAGCACG
GTGCTCGATC ACACGCTGGC CGCCGTGCGC GCCAGCGGTC TGCCCTGGCA CCTGGAGGAT
GCAGGCCACC CGGGCATGGG TGACTCGCTG GCCGCCGCCG TGCGCGCCAC GGCAGATGCG
CCAGGCTGGC TGGTCTTGCC AGCCGACCTG CCGCTGGTGA GCCCGCAGAC GCTGCTGAAA
GTGGCCGATG CGCTGCGCAG CGGAGCGCAG GCGGCGCAGC CCATCCATGC AGGCCAATGG
GGGCATCCCG TGGGTTTTGG GGCGGCCTGC GGCGAGGCCC TCATGGCGTT GAGTGGCGAG
AAGGGCGGTG CGCCTGTGCT GAAGGCGCTG CGCCAGGCCG GAGATGTGGT CCAGGTGGAG
GTGGACGATG CCGGCGTGCT CACCGACATC GACACCCTGG ACGATCTGGC GCGTGCAGAG
TTGGTGCTGC AGGCGCGCCT GAAGTTGATC TGA
 
Protein sequence
MLTDFKGRPC VLILASGRGE RFRASGGTMH KLSAPLGGST VLDHTLAAVR ASGLPWHLED 
AGHPGMGDSL AAAVRATADA PGWLVLPADL PLVSPQTLLK VADALRSGAQ AAQPIHAGQW
GHPVGFGAAC GEALMALSGE KGGAPVLKAL RQAGDVVQVE VDDAGVLTDI DTLDDLARAE
LVLQARLKLI