Gene Daci_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3931 
Symbol 
ID5749514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4331984 
End bp4332571 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID641299029 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001564947 
Protein GI160899365 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0278463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0911563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CTCTCAACCA ACAAGAGGTC GAGATCCAGG GCGTCAGCCC GGAGACGCCG 
CTGCTTTATG TGCTGCGCAA CGACATGCAG CTCAACGGCC CCAAGTTCGG CTGCGGCCTG
GGCGAATGCG GCGCCTGCGC CGTGCTGATC GACGGCAAGG TGGCCCGCTC CTGCTCCGTT
CCCGTGAGCG CGGTCCAGGG CATGAAGGTC ACGACGCTGG AAGGCCTGTC CCAGGATGCG
ACCCAGGCCG AGCACGCCCG CGTGGCGCGT GACTGGGAAG CAGCCCATCC GGCCGCCGTG
CCGGGGATGC CTGCCGGCAA GCCGGCAGCC GATGCACAGG GCAAGGCCGT CTACCGACTG
CACCCTGTGC AGCAGGCTTT CATTGACGAG CAGGCCGCCC AGTGCGGCTA CTGCACCAAC
GGCATGGTCA TGGCCCTGGT GGCCTTGTTC GACCACAAGC CCACGGCCAC CGACGAGGAA
GTCACCCAGG CCCTGTCCGG CCACCTGTGC CGCTGCGGCA CGCATGTGGA AATCATGCGG
GCCGCCGCCC GCGCCCGCGT GCTGATCGCC CAGGGAGGTG CAGCATGA
 
Protein sequence
MKFTLNQQEV EIQGVSPETP LLYVLRNDMQ LNGPKFGCGL GECGACAVLI DGKVARSCSV 
PVSAVQGMKV TTLEGLSQDA TQAEHARVAR DWEAAHPAAV PGMPAGKPAA DAQGKAVYRL
HPVQQAFIDE QAAQCGYCTN GMVMALVALF DHKPTATDEE VTQALSGHLC RCGTHVEIMR
AAARARVLIA QGGAA