| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3929 |
|---|
| Symbol | |
|---|
| ID | 5749512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4328338 |
|---|
| End bp | 4329669 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641299027 |
|---|
| Product | gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001564945 |
|---|
| Protein GI | 160899363 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.476483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0487834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACAC TCAAGAAAAT CACCCTCGGC GTGGTCGGCC TGGCCGCCGT GGCCGGCGCC
GCCTTCTGGC TGGCCACGGG CCGCAGCGAA ATCGCGCCCC TGCAGCAGAT CCCGGTGCAG
GAATTCAGCC AGCAGCAGAT CGACCAGGGG CGCCGCCTGG CCCACATGGG CGACTGCGCG
GTCTGCCACA CTGCCCCGGG CGGCCAGCGC AACGCAGGCG GCCTGGCCAT GCCCAGCCCC
TTCGGCACCA TCTACTCGAC CAACATCACG CCCGATGCCG AAACCGGCAT CGGCCGCTGG
TCGTACGAGG CCTTCGAGCG CGCCATGCGC CATGGTGTGG ACCGCGAGGG CAACTACCTG
TACCCCGCCT TCCCGTACAC CGCGTTCACC CGCGTGACCG ATGAGGACAT GAAGGCGCTG
TACGCCTTCC TGATGACCGA GCCGGCTGTC TCCAACGAGG CACCCAAGAC CGCGCTGAAC
TTCCCGTTCA ACGTGCGCCG CGGGCTGGCC CTGTGGAATG CGCTGTACCT GGAGCCGGGC
GAGCAGCCCG CGCCCGCCAA CCAGTCGGGC GAGTGGATTC GCGGCGCCTA CCTGGTCGAA
GGCCTGGGCC ACTGCGCGGC CTGCCACTCG CCGCGCAACC AGTTCGGCGC CGAGAAAAAG
GGTGCCGACC ACCTGGCCGG CGCCTTCATC GACGGCTGGG ATGCGCCCGC TCTCAACGAC
AAGGCCGTGG CTCCGCTGCC CTGGACGCGC GAGGACCTGG TCCGCTACAT GCAGACCGGT
TTCTCGGAGC GCCACGGCGT GGCCTCCGGC CCCATGGCGC CCGTGATCGA AGGCCTGTCC
CACCAGTCGG CCGAGGACAT CAACGCCATG GCCACCTACC TGATGTCGTA CCGCAAGCCC
GTGGCAGACG CCGCTGGCGC AGGGGACGCC CAGGCCCTGG TGAAGGAAAA GACAGAGGTT
GCCAAGCTGC CGGTCGACGC CCAGGGCTAC CGCCTGTACC AGGGCGCCTG CATGGCCTGC
CACCGTGCCG ATCCCAGCGG CGTGCTGGCC GGCAGCAGCT TCGGCGTGCG TCCCCAGCTG
TCGCTGAACA CCAACCTGTA CAGCGACTCG CCGACCAACG CCATCCATGT GGTGCTCAAC
GGCATCACGC AACCGGCGCG CCCGCAGCTG GGCACCATGC CCGCCTTCCG CCACAACCTC
AGCGACGATC AGATCGCCAC GCTGCTCAAC ACCATGCGCA GCCAGTACGG CCTGCAGCCC
TGGGCTGGCC TGAGCGACAA GGTCAAGGCC CTGCGCGAGG AAACACGCCC CGGCAAGGTG
GCGGCGCACT GA
|
|---|
| Protein sequence | MHTLKKITLG VVGLAAVAGA AFWLATGRSE IAPLQQIPVQ EFSQQQIDQG RRLAHMGDCA
VCHTAPGGQR NAGGLAMPSP FGTIYSTNIT PDAETGIGRW SYEAFERAMR HGVDREGNYL
YPAFPYTAFT RVTDEDMKAL YAFLMTEPAV SNEAPKTALN FPFNVRRGLA LWNALYLEPG
EQPAPANQSG EWIRGAYLVE GLGHCAACHS PRNQFGAEKK GADHLAGAFI DGWDAPALND
KAVAPLPWTR EDLVRYMQTG FSERHGVASG PMAPVIEGLS HQSAEDINAM ATYLMSYRKP
VADAAGAGDA QALVKEKTEV AKLPVDAQGY RLYQGACMAC HRADPSGVLA GSSFGVRPQL
SLNTNLYSDS PTNAIHVVLN GITQPARPQL GTMPAFRHNL SDDQIATLLN TMRSQYGLQP
WAGLSDKVKA LREETRPGKV AAH
|
|---|
| |