| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3919 |
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| Symbol | |
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| ID | 5749502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4319211 |
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| End bp | 4320332 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641299017 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001564935 |
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| Protein GI | 160899353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0652865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.12074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTT CCCCATGGCT GCTGGCCGGC GCACTTGCGC TGCCAGCCGT CGGCATGGCC
GCCCAGGCCC AGGCCGCACC CGCAAGCCCG TCCAATCCCC CGTCCGCATC CGTTGCCTTG
TCCGCCGAAC AGGCACAGGC GCTGGGCGTG CGTTTCGAAC CCATTCAGGC GGCACAGCGC
ATCGAGGTCT CGGCCCACGC GCGCGTCGTG CTGCGGCCCG ATGCCCAGGC CGTGGTGGCT
GCCCCCTATG CGGGCGCGGT GCCGCGCGTG CTCGTGGCCC TGGGCCAGAC GGTGCGTACC
GGCCAGCCCG TGGCGGTGTT CACCAGTCCG CAGCTGTATG AGGCGCGGCG CGCGCTGCTG
GAGGCCGAGT CCCAGTCGCG CCTGGCACGC CAGGCCCTGA CGCGCGACCA GGCGCTGCAT
GAGGACGGCA TCATCGCCGC CAGCCGCTGG CAGGCCACGC AGGCCCGCGC CGCCGAGGCC
GCGGCCATGG CGCAGGCGCG GCGCGCCGAA CTGGCCGCCA GCGGCCTGCA GTTCGTGGGC
AACGAGGTGC ACCTGGTGGC GCCCCGCGCA GGCCTGGTGA CCGAGGTGCT GGCGGTGCCG
GGCGCGCGGG TGGAGGCCTC GGCGCCGCTG CTGCGCGTGG CCGACCCCAA GGCGCTGGAA
CTGGACCTGC TGCTGGGCCG CGAGGTGCCA CTGCCCGGCG TGGGCGACCG CGTTCAGGTG
GCGGCGCGCG GTGCGCAGGG CAAGGTGGCC GGCATGGCCC CGGTCGGTGA CGGATCGGCC
GGCATGCGGG TGCGCGTTGC GCTGGAACGC GCTGGCGACC TGCGCTTGGG CGAAAGCGTG
ACCGCGTCGC TGGCCCTGGC CGGTGCGGAC GCCGGGCCTT CCGGCGGATC TGGCGGCGGC
TCTGGCGGTG CACGCCTGCG CGTGCCCGCT GCGGCGCTGG CGCATTGGAA CAACCGCACC
GGCGTCTTTG TCGCCACCGG GCAGGGGGCG CGCTTCATGC CGCTGTCCGT GGAGGCCAGC
GACGAGGCCA CGGCCGTGGT GCGCGGCACG CTGCCGCCCA AGGCGCGCAT TGCCGTGACG
GGCATTGCCG CGCTCAAGGG CCTGCTGGGC GGGGGTGAGT GA
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| Protein sequence | MMFSPWLLAG ALALPAVGMA AQAQAAPASP SNPPSASVAL SAEQAQALGV RFEPIQAAQR
IEVSAHARVV LRPDAQAVVA APYAGAVPRV LVALGQTVRT GQPVAVFTSP QLYEARRALL
EAESQSRLAR QALTRDQALH EDGIIAASRW QATQARAAEA AAMAQARRAE LAASGLQFVG
NEVHLVAPRA GLVTEVLAVP GARVEASAPL LRVADPKALE LDLLLGREVP LPGVGDRVQV
AARGAQGKVA GMAPVGDGSA GMRVRVALER AGDLRLGESV TASLALAGAD AGPSGGSGGG
SGGARLRVPA AALAHWNNRT GVFVATGQGA RFMPLSVEAS DEATAVVRGT LPPKARIAVT
GIAALKGLLG GGE
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