| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3910 |
|---|
| Symbol | |
|---|
| ID | 5749493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4304942 |
|---|
| End bp | 4305940 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641299008 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564926 |
|---|
| Protein GI | 160899344 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.032337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0571508 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCTT CGCTCTCCAA CCGCCGCAGC GCCATGGCGC GCCTGCTGGC TGCGGCCCTG
GCTCCGGCCT CGATGCTGAC CCCGGCACAC GCCCAGGCTG CCTGGCCGGT CAGGCCGATC
ACGCTGGTGA TTCCCTTCCC TCCCGGTGGC CAGACCGATG TGGTGGGCCG GCTGGTGGGA
GAGCGCCTGT CGCAGCGCCT GGGCCAGCCC GTGGTGGTGG AGAACCGGCC CGGCGTGAAT
GGCTCGCTGG CCTCCGAGGC CGTGGCGCGG GCGCGGGCCG ATGGCTACAC GCTGGTGATT
GGCGGGCCGG GCACGCATGC CATCAACCAG CTGGTCAATT CCAACGTGAA GTACGACGCG
CGGCGGGATT TCACGCACAT TGCCATGCTG GGGCGCGTGC CCATGCTGCT GCTGGCCTCG
CCCAGGCTGA AGGTCGCTTC GGTGGCCGAT GTGGTGGCCC TGGCCCAGGC CAGCCCCGGC
ACGGTGAATG TGGCGCTGAC GGGCATTGGC TCGTCCAGCC ATGTGACGAC GGAGCTGCTG
CGCCAGGCGG CCGGCGTGAG CTTCAACAAC GTTCCCTACA AGGGCGATGT GCCCGCCATG
ACCGATGTGA TGGGCGGCCA GGCAGACCTG CTGTTCGTGC CCGCCACCTC GGCCGTGGGC
TTTGCGCAGG CGGGCAAGCT GCGTGCGCTG GCCGTGGCAG GCGAGCGGCG CCTGGCGGCC
CTGCCAGATG TGCCCACCAT GGCCGAGGCC GGCCAGCCGC AGGTCGTCAA CTATTCATGG
ACCAGCCTGG CGGGGCCGCC GGGCATGCCG GCCGATGTGG TGGAGCGGCT CAACCAGGCC
TGCCAGTCCC TCCTGGCCGA ACCCGAGGTG GTGGCCCGCC TGGCCGCCAT GAGCAACGAG
CCCACGCCGG GCCTGCCCGG CCAGGCCGCC AGCTTCATCG CCGCCGAGGT GGCGCGATGG
AGCGAGGTGG TGCGCAAGGG AAACATCCAG GTCCAATGA
|
|---|
| Protein sequence | MRPSLSNRRS AMARLLAAAL APASMLTPAH AQAAWPVRPI TLVIPFPPGG QTDVVGRLVG
ERLSQRLGQP VVVENRPGVN GSLASEAVAR ARADGYTLVI GGPGTHAINQ LVNSNVKYDA
RRDFTHIAML GRVPMLLLAS PRLKVASVAD VVALAQASPG TVNVALTGIG SSSHVTTELL
RQAAGVSFNN VPYKGDVPAM TDVMGGQADL LFVPATSAVG FAQAGKLRAL AVAGERRLAA
LPDVPTMAEA GQPQVVNYSW TSLAGPPGMP ADVVERLNQA CQSLLAEPEV VARLAAMSNE
PTPGLPGQAA SFIAAEVARW SEVVRKGNIQ VQ
|
|---|
| |