Gene Daci_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3898 
Symbol 
ID5749481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4292768 
End bp4294006 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content59% 
IMG OID641298996 
Producthypothetical protein 
Protein accessionYP_001564914 
Protein GI160899332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.310044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0295208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CTGCAAATTC AACGAATGCA TTCACACCGT CTGCCGATAT CTACAAGGGA 
ATCTCGGTTC TCAGTTCAGA GGACTGGATC GGGCTGACGA CGTTCTTCGA GTCTGCAGTC
ACCGACAACC CGACCACCAC GGAGCTGATG CGCGCCATGC TGGGCATGCA GAAGCAGGAT
GCTTTCAGGC CGGAGTTTTC CGAAGCGGTG GAGCTGTTCG TCACGCTCAA GGGTGTCGGC
CAGAAGTTCA AGGCCGATGT GCAGGACAAG ATGCTGACCC TTGCCGACGA TATCGTTCAG
TACAACGATG TGGCGGCAAC CACCTATGAA CGGCTGATCG AGCTGGTGGA CCGATTCGAT
CTGGAGGGGG CACCCACCCC ATCGGCGGAG CCGGCGGTGG AAGCCAAGTG GAAGGCCCTG
GTCAAGGTTT GGGAAAGCGA TACGCCCAGC GGGCGGTCGG AGCAGATCAA GCGCAATTTC
AGCAGCGCGC TGGAGCAGTT GATTGAAGAC GCCAATGCGC GATCGGTGCG TGCCTTCGCG
CTGCAGAACT CCATTCTTGA CAACGGCAAC GGAATACTGA TGCGCCTGAA TGCCTGCAAG
ACCGCATTCA ATGGACAAAA GCAGAAGTTC ACGACCACGC TGGGCGCCGA GGGTGCTGCC
AACCAGAAGC TGAAGGCCGC AGTGGAGAAG CTGGAGAACG ACTTGAAGGC CCTGCGCCGC
AAGGAAAAGG ATGAAGTCAT CGTGCTGTCC ACTTCTCCGG CCTATCTGGC CATTCCGCTT
TTCGGGCCGC TGATTCTGGC GGGGGTGGAT ATCGGTGTGG GTGCGGACCT TGCGGTCACG
CGAAGGAAGA TTGCCGAGAA GGTGGATGAG GTGAGAACCA TCCAGGCCAC GATGGCTACG
AACGAGCGCT TCATCGGCTA CTACAACCGA AGCAATGATC GCTTTGACAG CATCAGCAAG
AGCATCGAAG ACCTGGGTCC CAAGCTCAAG ACGCTGGGCG AGGCATGGCG TGCGATTTCT
GCCGATCTGG GCAACATACA CAAGGTCTTG AGCACCACCG GCCGCAAGTC CCTGCAAGGG
GAAAACTGGT TCAGCCTGAC GGTGGTGCTG GGCACGGCCA AGAAGGGCTG GGCGCGTGTC
GCCGGGCAGG CAGACCATTT CCGCCGTTTC GGCGGCACGC CGAAGAAGGC ACAGAGCGTG
GACCAACTGG TGGAGCTTGC CAGCAAGAAG GCAGCCTGA
 
Protein sequence
MSDPANSTNA FTPSADIYKG ISVLSSEDWI GLTTFFESAV TDNPTTTELM RAMLGMQKQD 
AFRPEFSEAV ELFVTLKGVG QKFKADVQDK MLTLADDIVQ YNDVAATTYE RLIELVDRFD
LEGAPTPSAE PAVEAKWKAL VKVWESDTPS GRSEQIKRNF SSALEQLIED ANARSVRAFA
LQNSILDNGN GILMRLNACK TAFNGQKQKF TTTLGAEGAA NQKLKAAVEK LENDLKALRR
KEKDEVIVLS TSPAYLAIPL FGPLILAGVD IGVGADLAVT RRKIAEKVDE VRTIQATMAT
NERFIGYYNR SNDRFDSISK SIEDLGPKLK TLGEAWRAIS ADLGNIHKVL STTGRKSLQG
ENWFSLTVVL GTAKKGWARV AGQADHFRRF GGTPKKAQSV DQLVELASKK AA