| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3895 |
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| Symbol | |
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| ID | 5749478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4287439 |
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| End bp | 4288890 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298993 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001564911 |
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| Protein GI | 160899329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.373107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00809284 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTGC GCCATGGCCG GCGCAGACCC TGCAACCAAG AAGCATCCAT GCCCCATCAA
GATTCCCTTA CGCTGGACGA TCAGGTCCGG CCGACGACCA CCAAGAGCTG GTCCATCCTG
TCCTCCCCCT ACCGCCTGAC GACGATCGGC ATCGTCTCGC TGGTGGCCTT GATTGCCTTT
GAGGCCCTGG CCGTGGCCAC CGCCATGCCG GCCGTGGCCC GCGCGCTCGA TGGGGTGCCG
CTGTATGCGG TTGCGTTTGG CGTGACCCTG GCCACCAGCG TAGTGGGCAT GACGGTGGCG
GGCGGCTGGT GCGACGCGCG CGGGCCGGCG GCGCCGCTGT GGTCTGGCAT GGCGTGTTTT
GTGGCGGGGT TGCTGCTGGC GGGCTTTGCG CCTTCCATGC CGGTGTTTCT GGCGGGGCGG
CTGGTTCAGG GGCTGGGGGC CGGTGGCATG TCGGTGGCGC TGTATGTGCT GGTGGGCCGG
CGGTATCCCG AGGCACTGCG GCGGCGCATT TTTGCGGCGT TTGCCACGGC CTGGGTGGTG
CCCGCGCTGG TGGGGCCGGC GTTGAGCGGC CTGGTGGTGG AGCACCTGGG CTGGCGCTGG
GTGTTCCTGG GCGTGCCCCT GCTGGCCTTG CCGGCCGGGG CGATGCTGCG CCCGGCGCTC
CAGGGCCTGG GCGGCCATGG CCAGGGCATG CAGGGCGGTG TGCGGCGCGG GCTGTGGGCC
CTGGGCGCGG CCACGGGCAT CTGCCTTCTG TATGTGGGCG GGCAGAGGCA ATCGGCGGGC
GCCTTGGGGG CGGTGGCTGT GGCCGCGGCC TTGTCGCTGG TCTGCACCTG GAAGCTCTTG
CCGGCCGGCA CGCTGCGCGC CGGGCGCGGG CTGCCCAGCG TGATCGCCTT GCGCGGGCTG
GTGTTTGCAG CGTTCTTCGG GGCCGAGGCG TTCCTGCCGC TGGTGCTGGC GCGCGAGCAC
GGGCTGTCAG CGCCCATGGC GGGGCTGGTG CTGAGCGCGG GTGCGCTGGG CTGGTGTTCC
GCCTCCTGGT ACCAGGGACA CAGCCGCAAC GGCTGGAGCC GTCACCGCTT CCTGCGAGTG
GGCACCAGCG CGGTGCTGGC GGGCGTGCTG CTGACGGCAT CGGTGGCCTG GCCGGCCGTG
CCCGTGTGGG TGTCGGTGGT GGGCTGGATC GTGTCGGGGC TGGGCATGGG CCTGCTGTCG
GCAAGCCTGT CGGTGCTCAC GCTGTCCATG TCCGCACCCG GCGAGCAGGG CGCCAACAGC
TCGGCCCTGC AGCTGTGCGA GGCCATTGCC GTGGCGGCCA CCCTGGCCAT TGGCGGATCG
CTGTTCGCGG CCTTGCTGGA GACTTCGGCC CAGGCGGCCT ATCTGGCGAA TTTTGGGGTT
GCGGCCGGGG CGGCGGTGCT GGCGGCGGTG ATCGTGGGGC GAACGGATAC GCGGCAGGTG
TTTGTGGGGT GA
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| Protein sequence | MALRHGRRRP CNQEASMPHQ DSLTLDDQVR PTTTKSWSIL SSPYRLTTIG IVSLVALIAF
EALAVATAMP AVARALDGVP LYAVAFGVTL ATSVVGMTVA GGWCDARGPA APLWSGMACF
VAGLLLAGFA PSMPVFLAGR LVQGLGAGGM SVALYVLVGR RYPEALRRRI FAAFATAWVV
PALVGPALSG LVVEHLGWRW VFLGVPLLAL PAGAMLRPAL QGLGGHGQGM QGGVRRGLWA
LGAATGICLL YVGGQRQSAG ALGAVAVAAA LSLVCTWKLL PAGTLRAGRG LPSVIALRGL
VFAAFFGAEA FLPLVLAREH GLSAPMAGLV LSAGALGWCS ASWYQGHSRN GWSRHRFLRV
GTSAVLAGVL LTASVAWPAV PVWVSVVGWI VSGLGMGLLS ASLSVLTLSM SAPGEQGANS
SALQLCEAIA VAATLAIGGS LFAALLETSA QAAYLANFGV AAGAAVLAAV IVGRTDTRQV
FVG
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