| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3893 |
|---|
| Symbol | |
|---|
| ID | 5749476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4286383 |
|---|
| End bp | 4286880 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641298991 |
|---|
| Product | OsmC family protein |
|---|
| Protein accession | YP_001564909 |
|---|
| Protein GI | 160899327 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03562] peroxiredoxin, OsmC subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.254046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0151662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCCGTG GCGCCTGTGC TGTGATGGCG GCTTGTCCAA CCAACGCACA GGAGAAACAC
ATGTCCGAGA AAACCGCTTC CGTCCATTGG GAAGGTGCAG GCAAGACCGG CCAGGGCCGC
ATCAGCACGG AGACCGGCGC GCTCAAGGAC CATCCCTATG GCTTCGGCAG CCGCTTCGGG
GATGACCGCA AGGGAACGAA TCCCGAGGAG ATCGTGGGCG CCGCGCATGC GGCGTGTTTC
ACGATGGCCT TTGCCTTTGC CTGCGAGAAG GCGGGCATTG CCACCGAGAT GCTGGACACC
ACGGCCAAGG TCCGGCTTGC CAAGGATGGC GAGGGCTTCA AGATCGACCG CATTGCCCTC
ACGCTGCAGG CCAAGGTGCG CGGCATCGAC GATGCGCAGT TCCAGAAAAT CGCCCAGGAG
GCCAAGTCCC AGTGCCCGCT GTCCAAGGCG CTGGCAGGCG TGCCCGAGGT GACCTTGGTG
GCCACGCTGC TGCATTGA
|
|---|
| Protein sequence | MPRGACAVMA ACPTNAQEKH MSEKTASVHW EGAGKTGQGR ISTETGALKD HPYGFGSRFG
DDRKGTNPEE IVGAAHAACF TMAFAFACEK AGIATEMLDT TAKVRLAKDG EGFKIDRIAL
TLQAKVRGID DAQFQKIAQE AKSQCPLSKA LAGVPEVTLV ATLLH
|
|---|
| |