| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3856 |
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| Symbol | |
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| ID | 5749439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4249644 |
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| End bp | 4250453 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298954 |
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| Product | virulence protein SciE type |
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| Protein accession | YP_001564872 |
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| Protein GI | 160899290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.271888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC CCAGTTTCAC CTCACAGCTT TCCCTGGACG AGCAACTCAA GGCCCTGAAG
GACCAGATCC GCCAGGCCCC GGCCTCGGTG CCACTGCGCG TCTACTACTT CCAGCTGCTG
TGCGTGCTGG GCGAATGGCA AAAGGCACTG GAGCAGCTGC AGCTGTGCGC CCAGCTCGAC
CCGTCGTGCG AGCCCATGGC GCGCGCCTAC CGCGAGGCCA TCCGCTGCGA AGTGCTGCGC
GCCGAGGTCT TCGCCGGCAA GAAAAAGCCC TTTCTCATGG GCGAGCCCGC GCAATGGCTG
GCCTGCCTGA TCGACGCCCT AGCCCATGAA GGAGCGGCCG CCCAGGACCT GCGCGCCCGC
GCCCTGGACG AGGCGCCCGC CACCGCAGGC CACATGGGCG AGCACCGCTT CGAATGGCTG
GCCGACAGCG ATACCCGCCT GGGCCCCGTC TGCGAGCTGC TGGCGCACGG CAGCTACTAC
TGGCTGCCCT TCGACGCCAT TGCACAGATC GGCTTCGAGC CCGTGCAGGA CCTGCGCGAC
CTGATCTGGC TGCCCTGCGA GGTCACGCTG CGCGAGGGCG GCGCGCTGCA GGGCTTCATG
CCCGCGCGCT ATCCGCTGGC GCCCGGCGAT GACGACGCCG TCCGCATGTC GCGCCGCACG
CAGTGGAGCC CGCTGGACAC AGGCTCCTCC GATCCTGACG AATCCTCGGG CCACGTGGCC
GGCCACGGCC AGCGCACCTG GGTCACCGAC TCCGAGGACT TTCCCATGCT GCAGGTGCGC
CAGCTGGCGC TGGAAACCGC CACGCGATGA
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| Protein sequence | MPLPSFTSQL SLDEQLKALK DQIRQAPASV PLRVYYFQLL CVLGEWQKAL EQLQLCAQLD
PSCEPMARAY REAIRCEVLR AEVFAGKKKP FLMGEPAQWL ACLIDALAHE GAAAQDLRAR
ALDEAPATAG HMGEHRFEWL ADSDTRLGPV CELLAHGSYY WLPFDAIAQI GFEPVQDLRD
LIWLPCEVTL REGGALQGFM PARYPLAPGD DDAVRMSRRT QWSPLDTGSS DPDESSGHVA
GHGQRTWVTD SEDFPMLQVR QLALETATR
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