| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3844 |
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| Symbol | |
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| ID | 5749427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4236358 |
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| End bp | 4237692 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298942 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001564860 |
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| Protein GI | 160899278 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0110826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.484763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTGGC AACGCAAAGT CATCTGGGCC GAGGGCATGT TCCTTCGGCC CCAGCACTTC
CAGCAGCAGG AGCGCTTCCT GTTCCGGCAA CTGCAGTCAC GCAGCCTGCC GGGGCAGCCC
TTTTTCTGGG GCTTCTCGGA ACTGGAGCTG GACACCGATC TGCTGCGCAT GGGCAAGCTG
GGCATTCGTT CGGCCCACGG CGTGCTGCCC GACGGCACGC CGTTCCAGCT GCCGGGCGAC
GACGAGGCGC CCACCCCGCT GGACATCGGC AAGGACTTCA AGGACGTGGT GGTCCACCTG
GCGCTGCCGC TGCGCCGCTT CTCTGGCAGC GAAGTGACCT TTGGCGAAGG CTCCCAGAGC
CCTGCGCGCT ATCTCAGCGA CGTGACCGAA GTGGCGGACA GCAACGACGT GGGTGCCCAG
CCCGCCGAGG TGCAGCTGGG CCGGCTGCGC CTGAGCCTGC GCCCCGCCCA CGAACTGACC
GAAGGCTGGG TCAGCCTGCC CGTGGCCCAT GTGGTGGAGC GCCAGGCCAG CGGCGGCGTG
CTGCTGGAGC CCGGCTTCAT CCCCACCGTG GTCAACAACG GGCCCAGCTC GGTGCTCAAC
ACCTTCTGCA AGGAAATCCA CGGCCTGCTG CGCCAGCGCG GCGAAGTGCT GGCCCAGCGC
ATGATCCAGC CCGAGCGCGG CGGCATCGGC GAGGTCGGCG ACTTCCTGCT GCTGCAGCTC
ATCAACCACT GGACGGGCGC AGCCCAGCAC TGGGTGCGCA CCGCCAGCAT CCACCCCGAG
CGCCTGTTCG AGGAACTGCT GCGCCTGGCC GCCGAGCTGA CCACCTTCGA CCACGAGCGC
CGCCGCCCCG AGGTGCTGCC CGCCTACGAC CATGACGACC TGCGGCGCAG CTTCCCGCCG
CTGATGCTGG AGCTGCGGCG CAGCCTGTCC TCGGTGCTGG AGCAAAACGC CATCCAGATC
CCGCTGCACG ACCGCCAGTA CGGCGTGCGC GTGGCGCTGA TCCCGTCCAC CGAACTGCTC
ACCACCTGCG ACTTCGTGCT GGCCGCCCAT GCCCAGACCA CGCCGGAATT CCTGCGCACC
CACTTCCCCA CCCAGACCAA GCTGGGCCCG GTGGAGCGCA TACGCGACCT GGTGAATCTG
CACCTGCCCG GCGTCACGCT GCGGCCCCTG CCCATTGCCC CGCGCGAGAT TCCCTACCAC
GCGGGCTACA ACTATTTCGA GGTGGACACC ACGCACGACC TGTGGAACCA GCTGCAAAGC
TCCGGCGGCC TTGCCATGCA CGTCTCCGGC GAATTCCCCG ACCTGCAACT GGAGTTCTGG
GCCATCCGCC GCTGA
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| Protein sequence | MVWQRKVIWA EGMFLRPQHF QQQERFLFRQ LQSRSLPGQP FFWGFSELEL DTDLLRMGKL
GIRSAHGVLP DGTPFQLPGD DEAPTPLDIG KDFKDVVVHL ALPLRRFSGS EVTFGEGSQS
PARYLSDVTE VADSNDVGAQ PAEVQLGRLR LSLRPAHELT EGWVSLPVAH VVERQASGGV
LLEPGFIPTV VNNGPSSVLN TFCKEIHGLL RQRGEVLAQR MIQPERGGIG EVGDFLLLQL
INHWTGAAQH WVRTASIHPE RLFEELLRLA AELTTFDHER RRPEVLPAYD HDDLRRSFPP
LMLELRRSLS SVLEQNAIQI PLHDRQYGVR VALIPSTELL TTCDFVLAAH AQTTPEFLRT
HFPTQTKLGP VERIRDLVNL HLPGVTLRPL PIAPREIPYH AGYNYFEVDT THDLWNQLQS
SGGLAMHVSG EFPDLQLEFW AIRR
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