| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3809 |
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| Symbol | |
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| ID | 5749392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4190075 |
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| End bp | 4191253 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298907 |
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| Product | porin |
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| Protein accession | YP_001564825 |
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| Protein GI | 160899243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.261808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.302186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CTCTCAAGAG CATTCCCCAA CCCCCAGCCA AGCGCCCACT GCGGGCTTGT
CTGGCCCGCC TCGCCCCACT CGCCATGCTG GCAGCAGCAG GCGGCGCCCA GGCCCAGACC
GGCTCATCGG TGACGCTGTA CGGCCATCTG GACACCGGCA TCGAGCACCT GACGAATGTG
CAAGGCGGCG GATCGCTGAC GCGCATGCCC GGCCTCACGG GAACGGCACC GTCGCGCTGG
GGGCTGCGCG GCAGCGAGGA TCTGGGCGGC GGCCTGAGCG CCGTCTTTGC GCTGGAGTCA
GGCTTTGGCC CGGATGCCGG CACCTTCAAC CAGGGCGGGC GGGGTTTCGG GCGCCAGGCC
TGGGTGGGAC TGTCCGGCGG CTGGGGCAGC GTCTCGCTGG GGCGCAACTA CACCATGCTG
TACTGGGCGC TGTTCGACGC CGACCTGCTG GGTCCCAACG CCTTCGGTCT GAGCAGCCTG
GACAGCTACA TCCCCAACAC GCGCACCGAC AACTCCCTGG CCTACCGGGG GCGCTTTGGC
GCCTGGAGCC TGGGTGCGGC CTACAGCCTG GGACGCGATG CCGTCAACGC CGGCCCCAGC
CCGGCCGGCA CCAACTGCGC CGGCGAATCG GCCACGGACA GGCAGGCCTG CCGCCAATGG
TCCGCCATGC TGAAGTACGA CACCGCGCCC TGGGGCTTTG CGCTGGCCGT GGACGAGATG
CGCGGCGGCG CCGGCGCATT TGCAGGCCTG ACGCGCTCGG ACCTGAAGGA CCGCCGCATC
ATGCTCAACG GCTATGCCGC GCTGTCACCC ACCATCAAGC TGGGCGCCGG CCTCATGCGC
CGCGACAACG ACGCGGCCCA GGCGGCCTCG GCCAGCAACG GCGCCACGCC GCGCAGCACC
CTGGCATGGG GCGGCCTGTC CTGGTCCCCC AGCGCCGCCG TCGTGGTCGA TGGCCAGCTG
CAGCAACTGC GCTACGCCCA GGGCGGCGAC CGCTCCACCC TGCTGGCCCT GCGCGCCACC
TACAGGTTCT CCAAGCGCAC GGCGGTCTAT GCCCAGGCCG CGCGCATTGA CAACGGACAG
CGCCTGGCCA TCTCGGTCAG TTCGGCCGCA GCCGGTGGCA GCCCGCTGGC GGGCGCGTCG
CAGACCGGCC TGATGCTGGG CCTGCGCCAC TCGTTCTGA
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| Protein sequence | MKRTLKSIPQ PPAKRPLRAC LARLAPLAML AAAGGAQAQT GSSVTLYGHL DTGIEHLTNV
QGGGSLTRMP GLTGTAPSRW GLRGSEDLGG GLSAVFALES GFGPDAGTFN QGGRGFGRQA
WVGLSGGWGS VSLGRNYTML YWALFDADLL GPNAFGLSSL DSYIPNTRTD NSLAYRGRFG
AWSLGAAYSL GRDAVNAGPS PAGTNCAGES ATDRQACRQW SAMLKYDTAP WGFALAVDEM
RGGAGAFAGL TRSDLKDRRI MLNGYAALSP TIKLGAGLMR RDNDAAQAAS ASNGATPRST
LAWGGLSWSP SAAVVVDGQL QQLRYAQGGD RSTLLALRAT YRFSKRTAVY AQAARIDNGQ
RLAISVSSAA AGGSPLAGAS QTGLMLGLRH SF
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