Gene Daci_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3806 
Symbol 
ID5749389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4187934 
End bp4188587 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID641298904 
Producthypothetical protein 
Protein accessionYP_001564822 
Protein GI160899240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0571375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.271937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATGGC GGGTAGTACC AGCAGCAGCC CAAAAAATGC GCTGCTTCAG TCCCCTTCAC 
AAAACCGTTT GGAGAATTGC AATGTTGACC TCTCGTTCCG CATCCCGCAC CGCCGCCGTT
TCTTTCGCTG TAGCCACAGC GGCCCTGCTC GCTGCCTGTG GCTCGATGCA CAAGCCGGCC
AGCACTTTCT CCCAGGCATC GCTGCCCGCC CCCATACAGG TTCCTGCAGG GAACAAGGTC
GCGTGGGAAA CCGTAGGCAG CGGTGACATC ACCTACGAGT GCCGCGACAA GGCCAACGCG
CCTGGCCAGA CGGAATGGGT CTTTGTGGGA CCCGATGCAG TACTGAAGGA CCGCATGGGC
AAACAAGTGG GCCGCTACTA CGGCCCCCCT GCAACCTGGG AGGCCAACGA CGGCTCCAAA
CTCACCGCCA CCCAGCTGGC TGTGGCGCCG TCCGGCGCAG GCAATCTGCC TTACCAGCTG
GTGAAGGCAA ACCCGGCCAT GGGCAGCGGT GCGCTGGAGG GTGTGAGCTA CATCCAGCGC
GTGGCGCTCC AGGGCGGAGT GGCGCCGGCT GACAAGCCCT GCATGGCTGC CAACAAGGGC
CAGAAGACCA CCGTGAAGTA CCAGGCCGAC TACATCTTCT GGAAGCCCAT GTAA
 
Protein sequence
MRWRVVPAAA QKMRCFSPLH KTVWRIAMLT SRSASRTAAV SFAVATAALL AACGSMHKPA 
STFSQASLPA PIQVPAGNKV AWETVGSGDI TYECRDKANA PGQTEWVFVG PDAVLKDRMG
KQVGRYYGPP ATWEANDGSK LTATQLAVAP SGAGNLPYQL VKANPAMGSG ALEGVSYIQR
VALQGGVAPA DKPCMAANKG QKTTVKYQAD YIFWKPM