Gene Daci_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3796 
Symbol 
ID5749379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4176472 
End bp4177455 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID641298895 
Producthypothetical protein 
Protein accessionYP_001564813 
Protein GI160899231 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0260876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.253409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGACA TGGCGGGCCT GAGGCGTTTG CAGGAATGCC GCGATTGTTC AATTGCAGCC 
GCCAGCCGGC CCTCCCAGGC CTGTCCAGCA GGCGGCTGGC AAGCGCTCCC ACCGGTTGAC
ATTCTGTCCA CTGCAAGAAG CGGGATGCAG GCGCTGCGGC GGAGCCCTAG ACTGCGGCAA
TTGCCCACAG CGCCCATACC GCCAACCCCG CCCATACCGC CAACCGCGCC CATACCGCAA
ACCCCGCCCG CCATGCACAA CCTCGGTCTT TTCGACAACG AAGCTTGCGA ATCCGCCCCG
CCCTGCCACT GGACGCAGAT GGAGCACCAG CTCGATGAGC AAGGCTGCGC GCGCCTGCGC
GGCCTGCTGG ATGCGCAGCA GTGCCGCGAC CTGGCCGCTC TCTACGCAAG GGAGGACGGC
TTTCGCTCCC GCATCGTCAT GGCACGCCAC GGTTTCGGGC GCGGCGAGTA CCAATATTTC
GACTACCCCT TGCCACCGCT GCTGCAGCGC CTGCGCGAGC AGCTGTATCT GCGCCTGGCG
CCGGTGGCCA ATCTCTGGAA CCAGCGCATG GGGCTGGAGG TGCGCTATCC GGACCGGCTG
CAGGACTTCC TGGCGCGCTG CCACGCGCAG GGCCAGTTGC GGCCCACGCC GCTCATCCTT
CAATACGGTG TGGGCGACTA CAACTGCCTG CACCAGGATG TCTATGGAGA GCATGTGTTT
CCGCTGCAGG TGGTGCTGCT GCTGTCGCGG CCCGGGCGGG ACTTCACGGG TGGCGAGTTC
GTCATCACCC AGGCCGACGG CGACCGGCAG CGGGCCGATG TGATGGCACT GGACCAGGGC
GATGCACTGG TCCTGGCCGT GCGCCACCGG CCCGTGCCCG GGCGGCGCAC CGGCTACCGC
CGCGTGGCCA TGCGCCATGG GGTCAGCCGC ATCCACAGCG GCCATCGCCA TACCGTGGGG
CTGATCTTTC ATGACGCACT TTGA
 
Protein sequence
MLDMAGLRRL QECRDCSIAA ASRPSQACPA GGWQALPPVD ILSTARSGMQ ALRRSPRLRQ 
LPTAPIPPTP PIPPTAPIPQ TPPAMHNLGL FDNEACESAP PCHWTQMEHQ LDEQGCARLR
GLLDAQQCRD LAALYAREDG FRSRIVMARH GFGRGEYQYF DYPLPPLLQR LREQLYLRLA
PVANLWNQRM GLEVRYPDRL QDFLARCHAQ GQLRPTPLIL QYGVGDYNCL HQDVYGEHVF
PLQVVLLLSR PGRDFTGGEF VITQADGDRQ RADVMALDQG DALVLAVRHR PVPGRRTGYR
RVAMRHGVSR IHSGHRHTVG LIFHDAL