| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3794 |
|---|
| Symbol | |
|---|
| ID | 5749377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4175095 |
|---|
| End bp | 4175808 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298893 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564811 |
|---|
| Protein GI | 160899229 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3826] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0438272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.676027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGAC GGTCTGAAAT GGACAGGCTC AACAGCCAGG ATCGCTTCGC CCGCCTGGAT
TGGGCGCGGA TTGCCGCTGA GCTCGATGCC GAAGGCCATG CCCTGCTGCC GCAGCTGCTG
ACTGCGGATG AAAGCCGCGC CTTGGCCCGC GAGGCGGCAG CCGTGCCTGG CCTGCCGCCC
TGCATGCAGG CATGGCGCCC GGTGCTGTAC GGGCATCTGC TGGCCCTGGC CAACCGCTGG
CGTGAACACA TGGGCATGCA GCCTGGGTTG CCAGGCTGCT TCGAGGATTT CATGCGTGCG
GGCCGGCCAG CAGGCCAGAC GCAGCCGCAG CCGCAGCCGC AGCCACATCT GCTGCGCGTG
CCGCAAGCGG GTCATGCCCC GCTGCGTTCA TACAGCGAAG GTGCGGCGGT GTTTCCGCTG
CAGCTGGTGC TGCTGCTGTC CCGGCCGGGC CAGGATTTCG AGGGCGGCGA ATTCGTGATG
ACCGAGCAGC GCCCGCGCAT GCAATCGCGC CCCATGGTGC TGCCGCTGGG CCTGGGGGAT
GCGGCCATCA TCGCCACGGG GCCGCGCCCG GTGCGCGGTG CTGCGGGCTT TTACCGCGTG
CACCTGCGGC ATGCCATCAG CCGCGTTCAC CGTGGCGAGT GGCTGGGTCT GGAGCTGCTT
TTGCACGACG CGCCCTCGGC GCCAAAGGCT CTGCAAACAG ACCGCTGGCT ATAA
|
|---|
| Protein sequence | MVGRSEMDRL NSQDRFARLD WARIAAELDA EGHALLPQLL TADESRALAR EAAAVPGLPP
CMQAWRPVLY GHLLALANRW REHMGMQPGL PGCFEDFMRA GRPAGQTQPQ PQPQPHLLRV
PQAGHAPLRS YSEGAAVFPL QLVLLLSRPG QDFEGGEFVM TEQRPRMQSR PMVLPLGLGD
AAIIATGPRP VRGAAGFYRV HLRHAISRVH RGEWLGLELL LHDAPSAPKA LQTDRWL
|
|---|
| |