| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3793 |
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| Symbol | |
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| ID | 5749376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4172480 |
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| End bp | 4174642 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298892 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564810 |
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| Protein GI | 160899228 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.16695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.789951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA TGCATTCTTC CTTTTCCAGG GTTTCCAGCG CTCGCGCTGC CCAGTCCCTT
TCCGTGCGGC TGAGCCCGCT GGCCCTGGCC TGCGCCTTCA TCTGCCTGCC GGCGCAGGCT
CAAACCCAAA CGCCCACGCC CACGCCAACG CCCCCATCAA CCGCCCTGCC CGAGGTCCAG
GTCACCGGCC AGGCCGAACG CATCGGCCAG CAACTGGCCC AGCCTGCGCG CTCTGCCAGC
CATACCGGCG TCTCCAACCA GGAAGTGCCG GCCAGCGTGG ATGGTGTTTC TGCCGAGCAG
ATGCAGGAGC GTGGCGACTA CGCCCTGGTG GACGCCGTCA CGCGTACCGT GGGCCTGACG
GCCAGCAGCA CGCCGGGCAA CGGCGGCCTG GCCTTCAGCA GCCGCGGCTT TGCGGGGGTC
AATTCCGTGG GCGTGGCCGA AGACGGCATG GTGCTGGGCG TGGCCGCCGG CACCACGGCC
TATCCTGGTG ACAGCTGGGG CTACGAGCGC ATCGACGTGC TGCGTGGACC GGCCTCGCTG
ATGTATGGCA GCGGCACCAT GGGCGCCACC GTCAACGCCA TCCGCAAGCA GCCCAGCCGC
ACCAGCTCGG CCGAGGTGCT GGTGGGCGCG GGCACGGACG ACACGCTGCG CCTGGGCCTG
GGCGTGACCG GCGCCCTGGG CGCCTATGCC AGCTACCGCA TCGACAGCTA CACCGCGCGC
AGCGCAGGCG AGCGCGATCT GGACCAGTCG CGCAACGGCA AGTTCATGAG CACGCTGCGC
TTGGAGCCCA CGAGCGACCT GCAGATCGAC CTGATTGCCG ACCGCAGCGT GCAAAAGCCC
AGCCGCTACT GGGGCACGCC GGGCCTGGAC GGCAAGGTGG TGGAGTCGCT GCGCGACCGC
AATTACAACG CCGAAGACAG TGTGCTGCGC TATGCCGACG AGCGCCTGCG CGCCAAGGTG
CAATGGAAGG CCAATGACTG GCTGACGGTG CGCAACGAGC TGTACCACGT GAAGTCCGAC
CGCCACTGGC GCAACATCGA GGCCTACGCG CTCAACCCCG CCACCTGGAC CGTGGGCCGC
TCCGACTACC TGGAAATCCT GCACGACCTG GAGCAGACCG GCAACCGCCT GGGCCTGAAC
GTGGACCGGG GCTCGCACAA GATCGCCATG GGCTGGGAGG CCGCGCGCAT CAACCTGCGG
CTGTCCAACA ACTCGCCCTA TGGCGGCTCG TCCACGGTCT CGGCCTGGGA CCCTGTGCAT
GGCAGCTGGG CCAGCCCCGA TCTCACCGCC GCCAAGACAG AAACCGGCGT GACCCAGCAT
GCCCTGTACC TGGAAGATGC CTGGCGCATC AGCAACCGCT GGCTGGCCAT GGCCGGCCTG
CGCCGCGATG TCTACGACTT TGCCAGCCAC TCGCTGGTGG GCGGCACGGA CTTCGACAAG
ACGCTGGCCG CCACCTCCTG GCGCCTGGGC CTGACCTATG AGCTGGCCCG CAACACCCAT
GTCTATGGGC AGATCAGCTC GGGACACGAT CCCGTCAACA GCCTGGTGTC GCTGAACCTG
GCCAACACGG CTTACAAGCT GAGCAAGGGC CGCCAGGCCG AGATTGGCAT CAAGCAGCAG
GTGGCCGGCG GGCGCGGCGA ATGGACGCTG GCCGTGTTCG ACATCAAGAA GGACGACATC
ATCACGCGCG ACCCGGACCG GCCGGCCATC TCCATCCAGG GCGGCAGCCA GTCCTCGCGC
GGGGCGCAAG CCACTGCCGC CTTCCAGGCC ACGCCTGCCC TGCGCGTGGA GGGCAATCTG
TCGTACGTGG ATGCCCAGTT CGACAAGCTC ATCGAGGCTG GCGGCAACCG CGCAGGCAAC
CGTCCGCAGA ACGTGGCCAA GACCACGGCC AACCTCTGGG GCCACTACCG CGTGGGCGCC
TGGCAGGCCT CGCTGGGCCT GCGCTACGTG GGTGACCGCT TTGGCAACAA CGCCAATACC
GTGAACCTGC CCGCCTACAC CGTGGCCGAC GCCGCGCTGA GCTGGCAGAT GGACCCGCGC
ACCACCCTGA GCCTGATCGG CCGCAACCTG GCCGACAGGG TCTATGTGGG ATCGAGCTAC
GGCAGCCAGT TCCTGGTCGG GCAAGGCCGC CGCTTCGAGA TCGCGGCCCA TATCCGGTTC
TGA
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| Protein sequence | MFEMHSSFSR VSSARAAQSL SVRLSPLALA CAFICLPAQA QTQTPTPTPT PPSTALPEVQ
VTGQAERIGQ QLAQPARSAS HTGVSNQEVP ASVDGVSAEQ MQERGDYALV DAVTRTVGLT
ASSTPGNGGL AFSSRGFAGV NSVGVAEDGM VLGVAAGTTA YPGDSWGYER IDVLRGPASL
MYGSGTMGAT VNAIRKQPSR TSSAEVLVGA GTDDTLRLGL GVTGALGAYA SYRIDSYTAR
SAGERDLDQS RNGKFMSTLR LEPTSDLQID LIADRSVQKP SRYWGTPGLD GKVVESLRDR
NYNAEDSVLR YADERLRAKV QWKANDWLTV RNELYHVKSD RHWRNIEAYA LNPATWTVGR
SDYLEILHDL EQTGNRLGLN VDRGSHKIAM GWEAARINLR LSNNSPYGGS STVSAWDPVH
GSWASPDLTA AKTETGVTQH ALYLEDAWRI SNRWLAMAGL RRDVYDFASH SLVGGTDFDK
TLAATSWRLG LTYELARNTH VYGQISSGHD PVNSLVSLNL ANTAYKLSKG RQAEIGIKQQ
VAGGRGEWTL AVFDIKKDDI ITRDPDRPAI SIQGGSQSSR GAQATAAFQA TPALRVEGNL
SYVDAQFDKL IEAGGNRAGN RPQNVAKTTA NLWGHYRVGA WQASLGLRYV GDRFGNNANT
VNLPAYTVAD AALSWQMDPR TTLSLIGRNL ADRVYVGSSY GSQFLVGQGR RFEIAAHIRF
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