Gene Daci_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3782 
Symbol 
ID5749365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4159740 
End bp4160441 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID641298881 
ProductGntR family transcriptional regulator 
Protein accessionYP_001564799 
Protein GI160899217 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0416767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.193335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAC TTGCCACCCC CTCGCCCGAT GCGGCACAGA CCAGTGCCCA CGAAGAGGCC 
TACCAACACC TCTCTCATGG CATCCGCATG GGGCTGCTGA AGCCGGGCGA CAGGCTGGTG
GCCGATGACA TTGCCAACTC CATCGGCATG AGCCGCATGC CGGTCCGCGA GGCCTTGCGC
CGGCTGACTG CGGAAGGCCT GTTGGTCATG CCGCCGAACC GGGGCGCGAT CGTGCGGGAG
CTTTCCGAGA GCGAGGTCAT CGAGGTTTTC GAGATGCGTG CCGTGCTCGA AGGCCTGGCC
GCAGCCATGG CCGCCAGGCG CTGCACCCAG GCGGATGTGG ACGACCTGCA GGACCTGCTT
TTGAAAATGA AGCGTTGCGA GAGTGACCAG TCGGAATGGA TCACGGTGCA CCGGCGCTTT
CACGAGCGCT TTTGCCGCAT CAGCGCAGCC CCGCGCCTGT GCGAGCAGAT CTCGGCCCTG
CATTCGGTGG TCGAGCCGCT GATGCGGATC TGGCTGGAAA ACAACGAGCC CTCGCCGAAG
TTGCAGGAGC ACCACCAGCA ACTGGTGGCC AGCCTGCAGG CCGGTGACCC TGATCGGCTG
GAGCGCGAAG TGCGCGCGCA TGTGCGTGGA ACGGTAGACA GCATCACGCA GGCCATGCGC
AGACATCGGC CGCCCCAAGG CAAATCGCGC GCCAAGGCCT GA
 
Protein sequence
MPPLATPSPD AAQTSAHEEA YQHLSHGIRM GLLKPGDRLV ADDIANSIGM SRMPVREALR 
RLTAEGLLVM PPNRGAIVRE LSESEVIEVF EMRAVLEGLA AAMAARRCTQ ADVDDLQDLL
LKMKRCESDQ SEWITVHRRF HERFCRISAA PRLCEQISAL HSVVEPLMRI WLENNEPSPK
LQEHHQQLVA SLQAGDPDRL EREVRAHVRG TVDSITQAMR RHRPPQGKSR AKA