Gene Daci_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3779 
Symbol 
ID5749362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4156197 
End bp4157258 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID641298878 
Productbiotin synthase 
Protein accessionYP_001564796 
Protein GI160899214 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.195072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.526732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT GCAGCACCAC CCCAACGACT TCCGCCACCT CCGCACAGCC TGCGGCCGGC 
AGCCCATTGC AATGGCACGC ACGCCCCTCC AAAAGCGACA CGCTGCCGTT TGAAGGCGCC
TGGAGCGTGC AGGCCATCCA GGAACTGCTG GACAAGCCCT TCATGGACCT GATGTTCCAG
GCCCAGAGCG TGCACCGCGA GCACTGGCCT GCGGGCGACA TCGAGCTGGC CACGCTGCTG
TCGGTCAAGA CGGGCGGATG CCCGGAGAAC TGTGGCTACT GCCCACAGGC GGCCGAGTTC
GATACCGGCG TCAAGGCGGA AAAGCTCATG AGCGTGGACG AAGTCACGCG GGCCGCCCAG
GCCGCCAAGG ACGCGGGCGC CACGCGCTTT TGCATGGGCG CGGCCTGGCG CGCGCCCAAG
GACCGCGACA TCGAGAAGAT GAACGAGCTG ATCGGCGCCG TGAAGGGTCT GGGCATGCAG
ACCTGCGCCA CGCTGGGCAT GCTCCAGCCA CATCAGGCGC AGTCGCTGCG CGAAGCGGGC
CTGGACTACT ACAACCACAA CCTGGACACC GCGCCCGAGT ACTACCAGGA CGTGGTCAGC
ACGCGCCAGT ACCAGGATCG CCTGGACACG CTCAAGGCCG TGCGCGGCGC GGGCATCAGC
GTGTGCTGCG GCGGCATCAT CGGCATGGGC GAGGCGCCTG TGCACCGCGC GGGCCTGATC
GCCCAGCTGG CCAATCTCAA CCCCCATCCC GAATCCGTGC CCATCAACAG CCTGGTGCGC
GTGCCCGGCA CGCCGCTGGC GGACAGCGAG CCTGTCGATC CGCTGGACTT CGTGCGCGTG
ATCGCGGTGG CGCGCATCAC CATGCCCACG GCGCGCGTGC GCCTGTCGGC GGGCCGGCAG
CAACTGGGCG ACGCCGTGCA GGCCCTGTGC TTCATGGCTG GCGCCAATTC CATCTTCTAC
GGGGACAAGC TGCTGGTCAC CGGCAACCCC GATGTGGAAG CCGACACCAC GCTGCTGCGC
AAGCTGGGCC TGAGCGGCAC GCGGACCTCG GTACAGGAGT GA
 
Protein sequence
MTACSTTPTT SATSAQPAAG SPLQWHARPS KSDTLPFEGA WSVQAIQELL DKPFMDLMFQ 
AQSVHREHWP AGDIELATLL SVKTGGCPEN CGYCPQAAEF DTGVKAEKLM SVDEVTRAAQ
AAKDAGATRF CMGAAWRAPK DRDIEKMNEL IGAVKGLGMQ TCATLGMLQP HQAQSLREAG
LDYYNHNLDT APEYYQDVVS TRQYQDRLDT LKAVRGAGIS VCCGGIIGMG EAPVHRAGLI
AQLANLNPHP ESVPINSLVR VPGTPLADSE PVDPLDFVRV IAVARITMPT ARVRLSAGRQ
QLGDAVQALC FMAGANSIFY GDKLLVTGNP DVEADTTLLR KLGLSGTRTS VQE