Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3775 |
Symbol | |
ID | 5749358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4151579 |
End bp | 4152406 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641298874 |
Product | Ricin B lectin |
Protein accession | YP_001564792 |
Protein GI | 160899210 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.776108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATCA AGAAATGCAT TTCCGTCCTG CTGGCCAGCA GCTTCATTGC CCCGGCCGTG CCTGCGCTTG CGGGCGAAGA GACGGTGCAA CTCATGTCCA ATGGCCGCTA CCAGACCTAC AGCCTGCCCG ACGATGCGCA GCAGGTACAA CTGGTCGAGA CCTTGGCTGG CAACTGCAGC TACAACCAGA ACTGGGGCTA TGACCTGGGC CGCCGGGAGA TGTGGGTCAA GGGCGGCTGC GGCGGGCGTT TCCGCATCCT GACCGGCCTG CCCCAGGGCG CGCAAGGCCA GGAAGGCGGG AGCGACAACA CGGGAGCATG GATCGCCGGT GCCGCCGTGG CAGCCATTGC CGGCGCCGCC ATTTTGGCGA ACAAGCGCGA CAAGGACCGC GAGCGTGACC GCGACGACCA GTGGAACGAT GACCGCTATC CGGGCCAGCA GCCCGGCTAT CCCTCGTGGG GCGGACGGGA GGTGCGGGGC CAGAACGGGC TGTGCCTGGA TATATCCGGG GGGCTTCGCC CAGGCAATGG GCTCATCGTC TACCACTGCA GCGGCGGTGA GAATCAGCGC TTCACGTTGA CGCGTGATGG CGAGATGCGC GTGGGCGACC TGTGCCTGGA CGTGGCCGAT GGCAACACCC GCAATGGTGC GCGGGTGATT GCCTGGCAAT GCCGCAACCA GCCCAACCAG AAATGGGACT GGAGCCGTGG CCAGATCCGC AGCCGCTTTG CCAACAAGTG CCTGGACATC GAAGGCGGCA ATGCCCGGCC GGGCCAGCCC GTGATCGTGT GGTCCTGCGC CGGCGGCCCG AACCAGCGTT GGAACTGA
|
Protein sequence | MQIKKCISVL LASSFIAPAV PALAGEETVQ LMSNGRYQTY SLPDDAQQVQ LVETLAGNCS YNQNWGYDLG RREMWVKGGC GGRFRILTGL PQGAQGQEGG SDNTGAWIAG AAVAAIAGAA ILANKRDKDR ERDRDDQWND DRYPGQQPGY PSWGGREVRG QNGLCLDISG GLRPGNGLIV YHCSGGENQR FTLTRDGEMR VGDLCLDVAD GNTRNGARVI AWQCRNQPNQ KWDWSRGQIR SRFANKCLDI EGGNARPGQP VIVWSCAGGP NQRWN
|
| |