Gene Daci_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3775 
Symbol 
ID5749358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4151579 
End bp4152406 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content66% 
IMG OID641298874 
ProductRicin B lectin 
Protein accessionYP_001564792 
Protein GI160899210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.776108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA AGAAATGCAT TTCCGTCCTG CTGGCCAGCA GCTTCATTGC CCCGGCCGTG 
CCTGCGCTTG CGGGCGAAGA GACGGTGCAA CTCATGTCCA ATGGCCGCTA CCAGACCTAC
AGCCTGCCCG ACGATGCGCA GCAGGTACAA CTGGTCGAGA CCTTGGCTGG CAACTGCAGC
TACAACCAGA ACTGGGGCTA TGACCTGGGC CGCCGGGAGA TGTGGGTCAA GGGCGGCTGC
GGCGGGCGTT TCCGCATCCT GACCGGCCTG CCCCAGGGCG CGCAAGGCCA GGAAGGCGGG
AGCGACAACA CGGGAGCATG GATCGCCGGT GCCGCCGTGG CAGCCATTGC CGGCGCCGCC
ATTTTGGCGA ACAAGCGCGA CAAGGACCGC GAGCGTGACC GCGACGACCA GTGGAACGAT
GACCGCTATC CGGGCCAGCA GCCCGGCTAT CCCTCGTGGG GCGGACGGGA GGTGCGGGGC
CAGAACGGGC TGTGCCTGGA TATATCCGGG GGGCTTCGCC CAGGCAATGG GCTCATCGTC
TACCACTGCA GCGGCGGTGA GAATCAGCGC TTCACGTTGA CGCGTGATGG CGAGATGCGC
GTGGGCGACC TGTGCCTGGA CGTGGCCGAT GGCAACACCC GCAATGGTGC GCGGGTGATT
GCCTGGCAAT GCCGCAACCA GCCCAACCAG AAATGGGACT GGAGCCGTGG CCAGATCCGC
AGCCGCTTTG CCAACAAGTG CCTGGACATC GAAGGCGGCA ATGCCCGGCC GGGCCAGCCC
GTGATCGTGT GGTCCTGCGC CGGCGGCCCG AACCAGCGTT GGAACTGA
 
Protein sequence
MQIKKCISVL LASSFIAPAV PALAGEETVQ LMSNGRYQTY SLPDDAQQVQ LVETLAGNCS 
YNQNWGYDLG RREMWVKGGC GGRFRILTGL PQGAQGQEGG SDNTGAWIAG AAVAAIAGAA
ILANKRDKDR ERDRDDQWND DRYPGQQPGY PSWGGREVRG QNGLCLDISG GLRPGNGLIV
YHCSGGENQR FTLTRDGEMR VGDLCLDVAD GNTRNGARVI AWQCRNQPNQ KWDWSRGQIR
SRFANKCLDI EGGNARPGQP VIVWSCAGGP NQRWN