| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3773 |
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| Symbol | |
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| ID | 5749356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4148115 |
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| End bp | 4149542 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641298872 |
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| Product | TonB family protein |
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| Protein accession | YP_001564790 |
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| Protein GI | 160899208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.854647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.705204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTTC CCTTTCTTGC TCGGCTGGGT CTGGATCTCA ACGCTGACGA GCGCGCGATT
CGTCGTGCCT ATGCCCGCGC ACTCAAGGAA ATTGACCAGG AAACAGACCT TGACGGTTTT
CAGGCACTGC GGGAGTCCTA TCAGGCCGCG CTTGCCTGGC ATGCCCAGCG CCGTCCTGAA
ACGGCAATCC CACCCTCAAG TTCAGACAGC AAGGAAGACG CACCGCACTC GCGAAACTCG
TCCGACGCGC ATATCGATAC GGGGAATACG CCTTCCCGCA AGGCAGACCC TGCATATTCC
GCCCGCACCA TCGACCATGC CCGGCAGATA GCGCACGCAC TGCTGGCAGA CCTGCGCAAA
AAGCTGGCAG CCGGGTGGCC CCAAGACCGT ACTGCTGTCA GCATCTGGCT GAACGAGGTT
CTGAAGGACC AGCGCCTGAT CGACATGGAT GCGCGCCACT TCTTTGAATG GGGCATGGCA
GCCCTCCTGG CTGAGGGCTG GCAACCCCGC AAGGAGTTCC TGTTCGGCCC TGCGATAGAT
TGCTTTGGCT GGAAGCAAGA CCGTGGCCGC CTTGCAGCAT TTGGCCACGC CGGGGCCGTC
GTGGCATCCG CCATTGGCGA ACTGGAGTTC TTCGACACCA GGCCAAAGCA CGTACGGGTA
GCGCAAAAGG AATTGATCCA GGGTCTGCGC GAAAGCAGCA AGCCGCCGAC ATCGACCCTC
TTGAAGCACA GGGCCACGTT GCGGGATGTC GTCCAACACT ACCCTCACTG GCTGCACGTC
ATCACCGACA CACGCAATGC GAAGCGCTGG CTTGAGTGGG CAGATCAGAT ACCGCGATGG
CGTCAACGAC TGGCTCCCAG CGCCTCGTCC AGTACGAGCG AGAGAAAAGG TGGAAATTTC
TGGTTTGGCT GGATTTTTCT TCTCGTGCTT GTCCTGTCAA CACTGGGGAA GATCTCCGCG
CTCGTGAACT CATCTGGGCC ATCCGTGCCG AGGCACAGCC CTCCCTTGAC CACTCAGTCG
TTCGCACCGC CTGCGGCTGC AACTGACGGC ACTGCCTCCA GCTTTACCAG AATCGTCAAG
GACTTGCCTG CCTCAAGCGC GGCGCCTGTC CCCCTTCCCC TGGACGATGA CTCCCTCAAA
CTGCCGCCTG CGGCCGAGCT TCCTCGGCAT CTGCAGGCTC CGCGCCTGGC TTATCCGGAG
CAGGCCAAGC GCCTGCGACA AGAGGGCAGG GTCGTGATCA AGGCGCGAAT TGATCCTGAC
GGCAAGATTC GTCGTGCAGA AATAGACCAA AGCTCAAGCC ACGCCATCCT GGACGAAGCA
GCGATGGCCG CCGTGTTGAA GGCTTCCTTC ATTGCGGCGA AAGACAGCTC AGGCGCATCG
GTCCCCAGCG TCATCAAGAT TCCTATCAAA TTTGAGCTCG GCAACTAG
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| Protein sequence | MPLPFLARLG LDLNADERAI RRAYARALKE IDQETDLDGF QALRESYQAA LAWHAQRRPE
TAIPPSSSDS KEDAPHSRNS SDAHIDTGNT PSRKADPAYS ARTIDHARQI AHALLADLRK
KLAAGWPQDR TAVSIWLNEV LKDQRLIDMD ARHFFEWGMA ALLAEGWQPR KEFLFGPAID
CFGWKQDRGR LAAFGHAGAV VASAIGELEF FDTRPKHVRV AQKELIQGLR ESSKPPTSTL
LKHRATLRDV VQHYPHWLHV ITDTRNAKRW LEWADQIPRW RQRLAPSASS STSERKGGNF
WFGWIFLLVL VLSTLGKISA LVNSSGPSVP RHSPPLTTQS FAPPAAATDG TASSFTRIVK
DLPASSAAPV PLPLDDDSLK LPPAAELPRH LQAPRLAYPE QAKRLRQEGR VVIKARIDPD
GKIRRAEIDQ SSSHAILDEA AMAAVLKASF IAAKDSSGAS VPSVIKIPIK FELGN
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