Gene Daci_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3772 
Symbol 
ID5749355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4147308 
End bp4148072 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID641298871 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001564789 
Protein GI160899207 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.336695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.351238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG CCCTGCATGA ATCCGTGGCG CTGGCCGTTC ACGCCGGGGG CGCGGCCGAG 
ATCCTCATCG ACCGCCCCGA ACGCCACAAC GCCATGAGCA TGCCCATGTA CGAGGCATTG
CTCACGGCCT TGGAGCGCTG CCAGGCCGAC CCGGCCATCC GCTGCGTGAT GCTGCGCGGT
GCGGGCGGCA AATCCTTCAT CTCGGGCACG GACATCGCCT ACTTCAAGGA CTTCCATGAC
GGGCAGCAAG GCATTGCCTA CGAAGCATTC GTGGAGCGCG TGATCGACGC CGTGGAGCGC
ATCGCCGTGC CCACCATCGC CGTCATCGAC GGCTGGGCCG TCGGCGGCGG CCTGGCCCTG
GCCACGGCAT GCGACTTTCG CATCTGCAGC ACGGGCTCGC GCTTCGGTGC GCCGATTGCC
AAGACGCTGT CCAACACGCT GTCATCACGC AACATCGCGC GCCTGCTGGC CAGCCTGGGC
GTGCCACGCG TCAAGCGCAT GCTGCTGCTG GCGGACTACC TGTCAGCCGG GCAGGCCGAG
GCCTGCGGGT TCGTGCATGC GGTGGTGCCG GCAGATCAAT TGCAAGCCCA GGCACAGGCG
CTGGCCGAGC AGCTCATGGC CTTGTCGGCA ACCACCCAGT CAGCAGTCAA GGAAAGCCTG
AGGCGCATCG TCGTGGAGCA GCGGCTGGAT GATGAGGATC TGGTGTCGGT GGTTTATGGG
AGTGGGGAGT TTCGGGCGGG GGTGGCGCGG TTTACAGGAA CTTGA
 
Protein sequence
MSPALHESVA LAVHAGGAAE ILIDRPERHN AMSMPMYEAL LTALERCQAD PAIRCVMLRG 
AGGKSFISGT DIAYFKDFHD GQQGIAYEAF VERVIDAVER IAVPTIAVID GWAVGGGLAL
ATACDFRICS TGSRFGAPIA KTLSNTLSSR NIARLLASLG VPRVKRMLLL ADYLSAGQAE
ACGFVHAVVP ADQLQAQAQA LAEQLMALSA TTQSAVKESL RRIVVEQRLD DEDLVSVVYG
SGEFRAGVAR FTGT