| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3768 |
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| Symbol | |
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| ID | 5749351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4141755 |
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| End bp | 4144052 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641298867 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001564785 |
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| Protein GI | 160899203 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0661883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.152244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCATG CAGAGAGAAG ACCGCCAAGC TGGCAGCCCA GGCGCTGGTA TGCCTGTATT
TTCATCGTAT GCCTGGTGAT CATTGGCGTT GCGGGCGTTT CTCTGCTCTC CAGCTACGAA
ACGGCGCTCC ATGAAGAGAA GTCGAATCTC CTGCATGCGC TCTCTGCCTC TGCCGCTGAA
ACCAACAAGA TCATTCTTGC CACCTCTTTG GCGGTAGAGA GAACAGAACA ACTTTTGCTG
GCACCGGGCC GCCAAGGCGA AATCACGGCA GACCCTGATG CCGGCACCGA TATCCGCAAT
GCATTGATCC AGGAGGTGGC GGCGCTGCCC GGCGTCATCA GCATGAGCGT GCTTGATCGA
CATGGGAAAT GGTCCATTTC CTCACGTTTC AGCAAGCTGC CGCTGTCTCC CGACAACCCC
GAGCGCCCCA TCTGGAATGC AGCGCTGCAG ACAAAGCCTG GCGGCTTCTT CTTGCTGGAT
TCAAGCAAAT CGCCGGTCTT CGATATACCG TCCCTGGTGC TGGGGCGTCC GGTACGTGAC
TCCAGTGGGG CGCTGACTGG CATTGTGGTG GCCTTCGTTG CCGTGGATTC CATTCGCCAG
GCATTCAGCT CACTGCTGCT GGATGGCCAT CAGGTCATGG TCAGCCTGCC AAATGGCAAA
GACCTGGTCA GAATTCCCCA GGAGCATCCG CACATTCTGG ACGGGATGGA TTCCGGCCTT
GCAAAAATGA TGGCTGCAGG CGAGGGCATA TTGGACGCTG ACGATGGCTT TGGACACCCC
TGGATCGTCG CCATGCACCA CTCCAGCCCA GGCGGCATGG ATCTCGCCTA TGCCACGCTG
GCCGCCAAGG CAAAGCTCGC GGCTCCATGG TGGAGGTTTG GAAAAACCAT CATGGCATGG
GCGGCCATCA GCCTGGCTTC ATTTTTGTTG CTGGCGCAAT TGTGGATGCG TGAGCGCAGA
AGATCCTATT TCGAGGCAAG GGATCTGGTG CAGGTGCATT CACAGCTGAG GCACCATCTT
TTCCACGACC CTGCTTCCGA ATTGCTCAAT TCAACCGGAC TTGAGCAACT TCTGAACAGA
ACGCAAGCAC AGCGGCGTCC TGTTGCCATC CATGTCATCG GTATCGAGCA TTTGCAAGTG
CTGGCAGATA CGCTGGTTCC TGGAATGGAC AACCCACTGA TCTTGCAACT GGCAAAACAA
TTGCGCTCCT GTATTGGACA GAATGACGTC GCCGCCCGCC TTGCCATCGA GGAGTTCTGT
GTCGCCCAAT ATGAAGGAGA CCCCGATTCC ATGGCGAAAA CGCTCTCCAT CCGACTGGGT
GAAAAGCGCT ACATGCTGGG TGAGCGCAGC ATTTTGCTGT CTGTCTGCGT AGGGACGGCG
GTCTGCAAGA ACAACGAGGA CTGGAATCAA CTGCTGCGCG ACGGCCGCGC GGCAATGGAG
CGGGCGCGAT CCCAGGGACG TGGGCGATTC GTGAAATTCG AGCCTTCCGC CGATGGCCCC
ATGCAGGAGC AACTGCTGCT GGAGCAGGAT TTCCGGTCCG CCATCGGAAC AAGCCAGTTG
TTCATGGCGT ACCAGCCGAT CTGCCATGTG GCCACGGGAA AAATATCGGG GTTCGAGTCG
CTGATGCGCT GGAACAGCCC GGCCAGAGGG TCAGTGCCGC CAGGTGTCTT CATTCCCATG
GCAGAGCGGC GCGGCCTGCT GCTTCCCATC GACCAAATGG TGGAGCGCTC CCCGCTGCTG
GTTGCCAACG GATGGCCGTC CGATATCTCG GTGTCCATCA ACTGCCCGGC CTTTGAATTT
CTCGATCCAG GCATGGCGGT GCAATTGAAG GACCATCTGG ACCGCGCCGG CCTGAACCCC
GAGCGCTGCT ACATCGAGGT GACGGAATCG GCCCTGCTTC AAGATGATGA GCAGGTACTG
TCCGTCATGC GGCAAGTCAA GGCGCTGGGC GTGAATCTCG CCATCGATGA CTTTGGCTCC
GGCCATGCCA GCCTTTCCTA CCTGCACCGC TTTCCCTTCA ACCTGATCAA GATCGATCGC
AGCTTCATAC AGGCCATGGA CAAGGACGCC GGGGCTGCCG CGATTGTCGA GGCCACGCTG
GCACTGAGCC GCAGATTGGG CCTTGAAGTC GTCGCGGAAG GCGTGGAAAC CACGGAGCAG
TTTCTGCACC TGCAGCAGCT CGGGTGCACG TACGTCCAGG GATTCCTTAT CGCCCGCCCG
ATGAACGAGG AGCATGTCCT GCCGTTCCTG GAGAGCTTCA GGCTCAGCGA CGTGCTGGAG
TGTCCCGCGC ACGCCTGA
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| Protein sequence | MMHAERRPPS WQPRRWYACI FIVCLVIIGV AGVSLLSSYE TALHEEKSNL LHALSASAAE
TNKIILATSL AVERTEQLLL APGRQGEITA DPDAGTDIRN ALIQEVAALP GVISMSVLDR
HGKWSISSRF SKLPLSPDNP ERPIWNAALQ TKPGGFFLLD SSKSPVFDIP SLVLGRPVRD
SSGALTGIVV AFVAVDSIRQ AFSSLLLDGH QVMVSLPNGK DLVRIPQEHP HILDGMDSGL
AKMMAAGEGI LDADDGFGHP WIVAMHHSSP GGMDLAYATL AAKAKLAAPW WRFGKTIMAW
AAISLASFLL LAQLWMRERR RSYFEARDLV QVHSQLRHHL FHDPASELLN STGLEQLLNR
TQAQRRPVAI HVIGIEHLQV LADTLVPGMD NPLILQLAKQ LRSCIGQNDV AARLAIEEFC
VAQYEGDPDS MAKTLSIRLG EKRYMLGERS ILLSVCVGTA VCKNNEDWNQ LLRDGRAAME
RARSQGRGRF VKFEPSADGP MQEQLLLEQD FRSAIGTSQL FMAYQPICHV ATGKISGFES
LMRWNSPARG SVPPGVFIPM AERRGLLLPI DQMVERSPLL VANGWPSDIS VSINCPAFEF
LDPGMAVQLK DHLDRAGLNP ERCYIEVTES ALLQDDEQVL SVMRQVKALG VNLAIDDFGS
GHASLSYLHR FPFNLIKIDR SFIQAMDKDA GAAAIVEATL ALSRRLGLEV VAEGVETTEQ
FLHLQQLGCT YVQGFLIARP MNEEHVLPFL ESFRLSDVLE CPAHA
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