| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3763 |
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| Symbol | |
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| ID | 5749346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4134505 |
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| End bp | 4135785 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298862 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001564780 |
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| Protein GI | 160899198 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0325846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0119854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTGA CCCTGATCTT TCTGGCCGTG CTGATTGGCG GCATGGTGAT CGGCATGCCC
ATCGCCCAGG CGCTGGTGTT GACCGGCGTG GCGCTGATGT GGCACCTGGA CTTCTTCGAC
TCGCAGCTGC TTGCGCAGAA CCTGCAGGCC GGCTTCGACA ACTTCCCGCT GCTGGCCGTG
CCCTTCTTCA TCCTGGCCGG CGAGCTGATG AATGCAGGCG GCCTGTCGCG CCGCATCATC
GACCTGGCGC GGGCTTATGT GGGCCATATC CGTGGCGGCT TGGGCTATGT GGCCATTGGC
GCGGCGGTGC TGCTGGCGTC CATGAGCGGC TCGGCCATTG CCGATACCGC CGCCCTGGCC
ACCATCCTGC TGCCCATGAT GCGCGACCAG AAGTATCCCG ACAGCTACAG CGCAGGCCTG
CTCGCCTCGG GCGGCATCAT CGCGCCCATC ATTCCGCCGT CCATGCCCTT CGTGATCTAC
GGCGTGACGA CCAACACCTC GATCAGCAAG CTGTTCCTGT CGGGCGTGGT GCCGGGCCTG
ATCATGGGCG TGTTCCTGAT CTTTGCCTGG TGGTCCATCG CCCGCAAATA CGACCTGTCG
CGCGGCGAGC GCATGGCCTG GGGCCCGCGT CTGAAGGCAC TGGCCAAGAG CTTCTGGGCC
ATGATGATGC CGGTCATCAT CCTGGGCGGC CTCAAGGGCG GCGTGTTCAC GCCCACCGAG
GCGGCCGTGG TCGCAGCCGT CTACGCGCTG TTCGTGTCCA TGGTGATCTA CCGCGAGATG
ACATGGAGCC GTCTGTACGC CGTGTTCCTG GCCGCCGCCA AGACCACGGC CGTGGTCATG
TTCCTGTGCG GCGCCGCCAC GGTGACGGCC TACATGATCA CCCTGGCCGA CCTGCCCAAC
ATGCTGGCCG ACAGCTTCTC GGGCCTGCTG GGCAGTCCCG TGCTGTTCAT GGCCACGATG
ATGCTGTTCC TGCTGGTGGT GGGCACGGCC ATGGACCTGA CGCCAACCAT CCTGATCTTC
GGCCCCGTGT GCGCGCCGCT GGCCGTCAAG GCCGGCATCG ATCCCATCTA CTTCGGCTTC
ATGTTCATCT ATGTGGGCTG CATCGGCCTG ATCACGCCGC CCGTGGGAAC GGTGCAGAAC
GTGGTGGCCG GCGTGGGCCG GCTGCGCATG GAGACCGTGA TCAAGGGCAC GAACCCGTTC
CTGATGGTCT ATGTGCTGCT TGCCGTGCTT TTCGTGATTT TTCCGCAAAT CATCCTGGCC
CCTCTGCGCT GGATGCATTG A
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| Protein sequence | MVVTLIFLAV LIGGMVIGMP IAQALVLTGV ALMWHLDFFD SQLLAQNLQA GFDNFPLLAV
PFFILAGELM NAGGLSRRII DLARAYVGHI RGGLGYVAIG AAVLLASMSG SAIADTAALA
TILLPMMRDQ KYPDSYSAGL LASGGIIAPI IPPSMPFVIY GVTTNTSISK LFLSGVVPGL
IMGVFLIFAW WSIARKYDLS RGERMAWGPR LKALAKSFWA MMMPVIILGG LKGGVFTPTE
AAVVAAVYAL FVSMVIYREM TWSRLYAVFL AAAKTTAVVM FLCGAATVTA YMITLADLPN
MLADSFSGLL GSPVLFMATM MLFLLVVGTA MDLTPTILIF GPVCAPLAVK AGIDPIYFGF
MFIYVGCIGL ITPPVGTVQN VVAGVGRLRM ETVIKGTNPF LMVYVLLAVL FVIFPQIILA
PLRWMH
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