Gene Daci_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3760 
Symbol 
ID5749343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4132129 
End bp4133223 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID641298859 
ProductLacI family transcription regulator 
Protein accessionYP_001564777 
Protein GI160899195 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0180539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0106045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGTC AGATTCCGCC TGCCTCCCCA GAATCGCCCT CCGCCGATGT TTCCGGCCCG 
GCCCTGCCCG CCACGGGACG CGCACGCTCC TCGCGGGCCA GCGGGCGCAT CACGCTCAGC
GATGTGGCAC AGGCCGCTGG CGTCAGCCCC ATGACGGTCT CGCGCGCCCT GCGCGGCGAG
CGCCGCGTGG ACCCGGCCCT GGTCGAGAAA ATCCGCACGG CCGCCGCGCA GATGGGCTAC
GTGCCCGACC CCGCCGCTCG CGCCCTGGCC TCGCAGAAAA GCGCCCAGGT GCTGGTGCTG
GTGCCCATGC TGTCCAACAC CCTGTTCGTG GACCTGATCG AGGCGGTTCA CAAGGTGCTG
TTCTCTGCGG GCTACCACGC GCTGATCGGC GTGACCCACT ACGACCGGGC CGAAGAAGAA
CAGCTGCTGC GCACCTACCT GCCCATGCGC CCGGCCGGCC TGCTGCTCAC GGGTTTTGAC
CGCAGCCCCG CTGCGCGTGA ACTGGTGCAG GCCAGCAAGG TCCCCTGCGT GCACCTGATG
GAACTGGGCG GCGAGCCTGG TGCGCCCAGC GTGGGCTTTT CGCAGGCCGA GGCCGGGGCC
GCCATCACGC GGCACTTGAT GGAGCGCGGA CACAGGCGCA TTGCCTTTTG CGCAGGCCAG
CTCGATGCCC GCGTGATGCA GCGCGCCGCG GGCTACCGCC ATGCCCTGCA GGCGGCGGGC
CTGCATGACC CCGCCCTGGA ACTGCTCTGG CCCCGCCCCA CGTCGATGGC GCTGGGCGCC
GAGCTGCTGG ACGCGGCCCT GCGCCTGGAC CCGGCCGTCG ATGCCCTGTT CTTCTGCAAC
GACGACATCG CCCAGGGTGC GCTGCTGGAG GCTCTGCGCC GGGGGATACG CGTGCCCGAG
CAGATCGCCA TCGCAGGCTT CAACGACCTG CCCGGCAGCG ACCAGATGGT GCCGCCGCTG
ACCACCATCC GCACGCCGCG CGGCCATATC GGCACCGAAG GTGCGCGCAT GCTGCTGCAG
CTGATGCGTG GCGAGGCCGT GGAGCCGCCC AGCGTGGATC TGGGCTACGA ACTGGTGGTG
CGGCAGAGCA GTTGA
 
Protein sequence
MARQIPPASP ESPSADVSGP ALPATGRARS SRASGRITLS DVAQAAGVSP MTVSRALRGE 
RRVDPALVEK IRTAAAQMGY VPDPAARALA SQKSAQVLVL VPMLSNTLFV DLIEAVHKVL
FSAGYHALIG VTHYDRAEEE QLLRTYLPMR PAGLLLTGFD RSPAARELVQ ASKVPCVHLM
ELGGEPGAPS VGFSQAEAGA AITRHLMERG HRRIAFCAGQ LDARVMQRAA GYRHALQAAG
LHDPALELLW PRPTSMALGA ELLDAALRLD PAVDALFFCN DDIAQGALLE ALRRGIRVPE
QIAIAGFNDL PGSDQMVPPL TTIRTPRGHI GTEGARMLLQ LMRGEAVEPP SVDLGYELVV
RQSS