Gene Daci_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3745 
Symbol 
ID5749328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4115290 
End bp4115826 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID641298844 
ProductMarR family transcriptional regulator 
Protein accessionYP_001564762 
Protein GI160899180 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00569269 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.244623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CTCCCCTGCC CAACGGCCTG CAGCCCTCGG ACTTCTACAG CCCTGGCAGC 
TACACGCCCT TCGAGAGCGT GGGGTTCCTC ATGCGCAAGG TGCTCAGCTC AATCCTGCAG
CAGGCCGATG CGCAGTTGGC CGAGCATGAG CTGACCTATG TGCAGTGGCT GCCGCTGTAC
AAGCTGCTGC TGTGCAGCGA TGCCACCAAT GCCGGCATGG CGCGTGACCT GGGGCTGGAT
CCGGCCTCCA TCACGCGGGC GCTGGACCGG CTGGAGTCCA AGGGCATGCT GCGGCGCGAG
CGCTCCACCG TGGACCGCCG CGTGGTCAAG CTGGTGCTGA CCGATGAAGG CCGTGCCATG
GCGGCCAAGG TGCCGCAGGT GCTGTCCAGC GTGATGAATG CCCATATGGC CGGCTTCAGC
CATGACGAGT CGCGCCAGCT GCTGGACATG CTTCGCCGCC TGCTGACCAA TGGCGATGCG
ATGCGCGCGC CGGAGGCTGC GCCGCCGGCC CCTGCGCCTG CCACGCCTGT CGGCTGA
 
Protein sequence
MTQPPLPNGL QPSDFYSPGS YTPFESVGFL MRKVLSSILQ QADAQLAEHE LTYVQWLPLY 
KLLLCSDATN AGMARDLGLD PASITRALDR LESKGMLRRE RSTVDRRVVK LVLTDEGRAM
AAKVPQVLSS VMNAHMAGFS HDESRQLLDM LRRLLTNGDA MRAPEAAPPA PAPATPVG