| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3742 |
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| Symbol | |
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| ID | 5749325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4110570 |
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| End bp | 4112204 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298841 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001564759 |
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| Protein GI | 160899177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0155097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.299705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCT CTACCACCGC CGTGCCGGAG TCGGCGCAGC CGGGTGGGCC GACCGTGCCG
CCTGCCGCGC CACCCTCGGC ACCGCCTGCC ATGCCCGCAC GGCCCGCACC GCTCAAGGGC
GCCCAGCTGG CCCTGGGCAC GCTGGCCCTG TCGCTGGCCA CCTTCATGAA CGTGCTGGAC
TCGTCCATTG CCAACGTCGC CATTCCGGCG ATTTCGGGCG ACGTGGGCGT CAGCCCCAGC
CAGGGCACCT GGGTGATCAC CAGCTTTGGC GTGGCCAACG CCATCTCGGT GCCGCTCACG
GGCTGGCTCA CGCAGCGCTT CGGCGCCGTG CGCCTGTTCA CCATGAGCGT GCTGCTGTTC
GTGCTGACCT CCTGGCTGTG CGGCTTTGCC TCGTCGCTGG AGATGCTGGT GCTGTTCCGC
GTGCTCCAGG GGCTGGTCGC CGGCCCCATG ATCCCGCTGT CGCAGACGCT GCTGCTGTCC
AGCTACCCGC CGGCCAAGGC CGGGGTGGCG CTGGCGCTTT GGGGGATGAC CACCCTGGTG
GCGCCCGTGG TCGGGCCACT GCTGGGGGGC TGGATCACGG ACAACATCTC CTGGCCCTGG
ATCTTCTACA TCAACGTGCC CGTGGGCCTG CTGTCGGCCC TGATGACCTG GAGCATCTAC
CGCAGCCGCG AGACCCCCAC GCGCAAGCTG CCCATCGACT CCGTGGGCCT GGCCCTGCTG
GTGCTGTGGG TGGGCGCGCT GCAGCTGATG CTGGACAAGG GCAAGGAACT GGACTGGTTC
GCCTCGGGCG AGATCGTCAC GCTGTGCGTG CTGGCCATCG TGAGCTTCGT GGTCTTCCTG
GTCTGGGAGC TGACGGATGC GCACCCGGTG GTGGATCTGC GCCTGTTCAT GCGCCGCAAT
TTCGCGGCGG GCTCGGTGGC ACTGTCGATT GCCTACGGCC TGTTCTTCGG CAACGTGGTG
CTGCTGCCGC TGTGGCTGCA GCAGTGGATG GGCTATACCT CCACCACGGC CGGCATGGCG
CTGGCGCCGG TGGGCATCTT CGCCATCATC CTGACGCCGC TGGTGGGCCG CAAGGTCACG
CAGTGGGACC CGCGCAAGAT GGCCACGGGC GCCTTCGTGG TGTTCGCCCT GGTGCTGTGG
ATGCGCTCGC GCTTCACGGT GGAGACGGAC TTCATGCACA TCCTGGTGCC CACGCTGATC
CAGGGCGGGG CCATGGCGTT CTTCTTCATC CCGCTGACGA CGATCACGCT GTCTGGCATC
TCGCCGGACC GTATCCCGGC CGCCGCCGGC CTGAGCAACT TCGTGCGCAT CACGGCGGGT
GCCATGGGCA CCTCCATCGC CACCACGCTG TGGGAAAACC GCGCCGCGCT GCACCACGCC
CATCTGACCG AAGGGCTGAT CCAGGGCCAG GGCGTGTTCG GCGTCACCCT GCAGGGGCTG
CAGGCCGCAG GCCTGAGCCA GGCGCAGGCG CTGGCCCAGA TCAACCGGCT CATCGACCAG
CAGGCCTATA CGCGGGCGGC GGACGACATC TTCCTGGCGT CGTCCGTGCT GTTCCTGGTG
CTGATCGTGC TGATCTGGAT GACCAGGCGC CCTGCGGGCC ATGCCGGTGG TGCCGAGGCG
GCCGGCGCCC ATTGA
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| Protein sequence | MTSSTTAVPE SAQPGGPTVP PAAPPSAPPA MPARPAPLKG AQLALGTLAL SLATFMNVLD
SSIANVAIPA ISGDVGVSPS QGTWVITSFG VANAISVPLT GWLTQRFGAV RLFTMSVLLF
VLTSWLCGFA SSLEMLVLFR VLQGLVAGPM IPLSQTLLLS SYPPAKAGVA LALWGMTTLV
APVVGPLLGG WITDNISWPW IFYINVPVGL LSALMTWSIY RSRETPTRKL PIDSVGLALL
VLWVGALQLM LDKGKELDWF ASGEIVTLCV LAIVSFVVFL VWELTDAHPV VDLRLFMRRN
FAAGSVALSI AYGLFFGNVV LLPLWLQQWM GYTSTTAGMA LAPVGIFAII LTPLVGRKVT
QWDPRKMATG AFVVFALVLW MRSRFTVETD FMHILVPTLI QGGAMAFFFI PLTTITLSGI
SPDRIPAAAG LSNFVRITAG AMGTSIATTL WENRAALHHA HLTEGLIQGQ GVFGVTLQGL
QAAGLSQAQA LAQINRLIDQ QAYTRAADDI FLASSVLFLV LIVLIWMTRR PAGHAGGAEA
AGAH
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