| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3738 |
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| Symbol | |
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| ID | 5749321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4104734 |
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| End bp | 4106731 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298837 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001564755 |
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| Protein GI | 160899173 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.430842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0543439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATG CCCAGTCAGC CGACAACAAG GCCGACACGT CCCTGTCCAC GGTGGTGGTG
ACCGCCTCGG GCACAGCCGT GGACATCAAG GAAGCGCCGG CCAGCATCAG CGTGATTACC
CGCGAGGACA TCGAGCGCAA GCCCGTCACC AGCATCGGCG AGCTGCTGTC CACCATTCCC
GGCGTGACCG GCGGCCTGTC CGGCACGGGC GCCCAGTCCA AGATCAAGCT GCGCGGCCTG
CCCGAGAAGT ACACGCTGAT CCTGGTGGAC GGCAAGCGCC AGGGCAACTC GGCCGGCATC
AACTACCGCG ACGACCTGGG CTCGCAGGAT CTGGACTGGA TCTCGCCCGA GATGATCGAG
CGCATCGAGG TCGTGCGCGG CCCCATGTCC TCGCTGTACG GCTCCGACGC CATGGGCGGC
GTGATCAACA TCATCACGCG CAAGATCGGC AAGCGCTGGA GCGGCTCGAC CACGCTGAAC
TACAGCAAGC CCTCCGACGG CGACCGCGGC GACACGCGCC AGCTGGGCTT CAACATCAGC
GGCCCGCTGT CCGACAAGTT CGGCCTGCGC CTGGGCGGCA ACTACACGGA CCGCGCAGCC
GACGAGAGCA CGGGCGGCTT CCCGGGCACC TACCAGTCCA CGGCCGGCTC GCGCAAGCAA
AACCTCAACG CCCTGCTGAA CTGGCAGCTC ACGCCCGACC AGGTGATCGG CATCGAGGCC
GCGCAAGGCA TCCAGCGCGC CACGGGCTCC GACGCGCGCA CGGCGTCGGG CGACCAGGTG
GTCTATCCCT GGGGCCTGAG CAAGCTGGAG CAGACCAAGT TCGGCATCAG CCATGACGGG
CGCTGGGGCG ACCTGACCTC CAAGCTCAAC CTCGTGCACA ACAAGTATGA GGACAAGGGC
GACACCATCG GCAACAACTC CAAGGAAACC ACGCTGGACG GCCGCATCGA CAAGCCGTTG
AAGCTGTGGG GCCTGGACCA GGCCATGACG CTGGGCATGC AGTGGCGCCG CGAGTCGCTG
GACAACCGCG ACACCATCGG CCTGGCTCCC ATCGACTACG CGGGGCGCCC GGTCTCGGGC
TCGGGCCTGA GCGCCACCAC CTGGGCGCTG TTCGGCGAGG ACCAGATCTT CCTGCGCGAC
AACCTGGCGC TGACGCTGGG CCTGCGCATG GACCATCACC AGAAATACGG CAACAACTGG
AGCCCGCGCG CCTATCTGGT GTACCACCCG GCCTCGGAGT GGACGGTGCG CGGCGGCGTC
TCGCGCGGCT TCCGTGCGCC CAACCTGAAG GAAAACTCGG CCAGCGCCGC CACGCAATCC
GGGGGCAACG GCTGCCGCAG CCTGGCCGGC ATGGGCTGGA CCAGCACCAG CGTGAATGCC
GACGGCACGC GCGGCTGCTA CATGGCCGGC AACCCCGACC TGCAGCCCGA GACCAGCACC
AACTTCGAGC TGGGCACCAG CTGGGACCGC AATGGCTGGG CGCTGGGCGC CACCTACTTC
CACACCAACT TCAAGAACAA GATCGACTAC CAGCCGCTGG GCTTCTACAA CGGCTTCTGG
TGGACCCGCA TGGCCAACGC CCAGCGTGCC CGCACGCGCG GCCTGGAAGG CTTCGTGAAC
GTTCCCCTGG CAAAGGGCCT GACCTGGAAC ACCAACATCA CCAAGATGTT CGAGTCCAAG
AATCTGAGCA CGGGCGCCTC GCTGCTGGCC GTGCCCGAGC TGTCCATCTA CTCGTCGCTG
CAGTGGCAGA TCCGCCAGGG CTGGTCCGCC ATGTTCAGCG CCCGCCACGT GGGCAAGGAA
GTCGTGACCA CGGGCACGGC CACCACCTTC GCCAAGGCCT ATACGACGTT CGACGTGTCC
ATGAACTACA ACGTGACCGA CACCCTGACC CTGCGCGCCG GCATCATCAA CCTGGCCGAC
AAGGAAACCC GCACCATCGG CGCCAACTAT GACAACGGCG GCCGTACCTA CTTCGTGGGG
ATGACGGCGC GGTTCTGA
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| Protein sequence | MAHAQSADNK ADTSLSTVVV TASGTAVDIK EAPASISVIT REDIERKPVT SIGELLSTIP
GVTGGLSGTG AQSKIKLRGL PEKYTLILVD GKRQGNSAGI NYRDDLGSQD LDWISPEMIE
RIEVVRGPMS SLYGSDAMGG VINIITRKIG KRWSGSTTLN YSKPSDGDRG DTRQLGFNIS
GPLSDKFGLR LGGNYTDRAA DESTGGFPGT YQSTAGSRKQ NLNALLNWQL TPDQVIGIEA
AQGIQRATGS DARTASGDQV VYPWGLSKLE QTKFGISHDG RWGDLTSKLN LVHNKYEDKG
DTIGNNSKET TLDGRIDKPL KLWGLDQAMT LGMQWRRESL DNRDTIGLAP IDYAGRPVSG
SGLSATTWAL FGEDQIFLRD NLALTLGLRM DHHQKYGNNW SPRAYLVYHP ASEWTVRGGV
SRGFRAPNLK ENSASAATQS GGNGCRSLAG MGWTSTSVNA DGTRGCYMAG NPDLQPETST
NFELGTSWDR NGWALGATYF HTNFKNKIDY QPLGFYNGFW WTRMANAQRA RTRGLEGFVN
VPLAKGLTWN TNITKMFESK NLSTGASLLA VPELSIYSSL QWQIRQGWSA MFSARHVGKE
VVTTGTATTF AKAYTTFDVS MNYNVTDTLT LRAGIINLAD KETRTIGANY DNGGRTYFVG
MTARF
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