Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3729 |
Symbol | |
ID | 5749312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4096755 |
End bp | 4097693 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298828 |
Product | periplasmic binding protein |
Protein accession | YP_001564746 |
Protein GI | 160899164 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0685211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00414028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACCTGC TTGTGCGCCT GCCCCGCCTT CTGCTGCTGA TCGCCGTGCT GGCCTGCGCG GGCGGCACAG GCAACGCCTT TGCGCAAAAG GCGGCGGATG CGGGAACGGG CGGGGCAACC ACCGCCTACA CCGTCACCGA CATGCGCGGC CGTCAGGTGC GCCTGGAGCG CGTGCCGCAG CGCATCGTCT CGCTGCTGCC CTCGCTGACC GAATCGCTGT GCGCGCTGGA CGCCTGCGAG CGCATCGTGG GCGTGGACGA GTTCTCCAAC CACCCGGCGC GCGTGGCCGC CCTGCCCAAG CTGGGCCACA CCTTTGCCCC GCTGGTCGAG GCCACCGTGC GGCTCAGGCC CGACGTGGTG CTGATGGCGT ACTCCGCACC CGTCATCGCA CAGCTGGAGC GCTTCGGCAT TCCCGTGCTG GCACTGGACG CCAACGACAT GGCGCAGCTG GAGCAGGTAC TGCACAAGCT CGACCAGCTG CTGCAGGTGC AGCGCGCCAA CGCCCTGCTG GCGCGCATGC AGGCCGAGGT GGACCAGCAG GCCAAGGCGC TGGCGGCGCT CACGCCCGCC GGGCAGAAGG TGTATTTCGA AGTGGACGCC ACGCCTTACG CGGCAGGGCC GGACTCCTTC ATAGGCCAGC TGCTGCAGCG CCTGGGCGCG CGCAATGTGC TGCCGCAGAA CCTGGGGCCC TTCCCCCGCA TCACGCCCGA ATACGTGCTG CGCCAGCAGC CAGAACTCAT CATCCACACG CCGCAGACGC CATCGGCCAG CTTTGCCACC CGCCCCGGCT GGAGCCGCAT GCCCGCCGTG CGCTCGGGCC GCATCTGTGC ATTGGACCTG GTCGAAACGG ACGTGGTCTC CCGCCCCGGC CCGCGCCTGG GCGAGGCAGC GCGGGCGCTG GGCCGCTGCC TGCAGATGCC GGGCGCAGCG CCGCGTTGA
|
Protein sequence | MHLLVRLPRL LLLIAVLACA GGTGNAFAQK AADAGTGGAT TAYTVTDMRG RQVRLERVPQ RIVSLLPSLT ESLCALDACE RIVGVDEFSN HPARVAALPK LGHTFAPLVE ATVRLRPDVV LMAYSAPVIA QLERFGIPVL ALDANDMAQL EQVLHKLDQL LQVQRANALL ARMQAEVDQQ AKALAALTPA GQKVYFEVDA TPYAAGPDSF IGQLLQRLGA RNVLPQNLGP FPRITPEYVL RQQPELIIHT PQTPSASFAT RPGWSRMPAV RSGRICALDL VETDVVSRPG PRLGEAARAL GRCLQMPGAA PR
|
| |