Gene Daci_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3728 
Symbol 
ID5749311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4096385 
End bp4096705 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content65% 
IMG OID641298827 
Producthypothetical protein 
Protein accessionYP_001564745 
Protein GI160899163 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.015177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00988934 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCATCA CCACCACCCC CCAGATCGAA GGCCGCCGCA TCACCCGCTA CTGCGGCGTG 
GTCGCGGGCG AGGCGATTTT GGGCGCCAAT GTGTTCAAGG ATTTGTTTGC CGGGCTGCGC
GACATCGTGG GCGGGCGGTC GGCCACCTAT GAGCGCGAGT TGCAGCGGGC GCGCGAGATT
GCGCTCAAGG AGCTGGAGGA ACGCGCCCAG GAACTGGGCG CGAATGCCGT GGTGGGGGTG
GACCTGGATT ACGAAGTGCT GGGCCAGGGC AATGGCATGT TGATGGTGTC TGCCAGCGGC
ACGGCAGTGG TGCTGGAGTA G
 
Protein sequence
MIITTTPQIE GRRITRYCGV VAGEAILGAN VFKDLFAGLR DIVGGRSATY ERELQRAREI 
ALKELEERAQ ELGANAVVGV DLDYEVLGQG NGMLMVSASG TAVVLE