Gene Daci_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3727 
Symbol 
ID5749310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4095126 
End bp4095689 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID641298826 
Producthypothetical protein 
Protein accessionYP_001564744 
Protein GI160899162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00259449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0064722 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGATG TGCAGGTATT ACCTTGGTAC CTGCGGCTCG AGTGGATTAG TCACACGCAG 
CATCTGAACA TGCCCCTGCA GCAGGGTAGC CGGCTGATCT CGGGATTTGA CGAAGTGCGG
CCCACCACGG GCGCCCGTGG CTACGGCCGA ACCGTCAGCG GCCCCAGCTA TGCGCAGGCG
GTGAAGTTCG ACCTGAGGTA TCCGGGTCAG GTGTTTGATG AAGAGACGGG GCTGTCGTAC
AACCTGCACA GGTACTACGA TGCGGCGACG GGGCGGTATA TGCAGGCGGA CCCGATCGGG
TTGGAGGATG GGTGGAATCG GTTTGGGTAT GTGGCAAACA ACCCGCTCAA CGATGTGGAT
CCGCAAGGCC TGCACCCATT GCTTACAAGA ATGCAGGGCC TGTACTACCG CTACGGCTGG
CAGGGAGCAG TCAATCCAGG CACTCCTTCA AAGCTACAAC TTCGGCAAGC ACCTGAAGAC
AAGCAGGTGC AAGACACCAT TCCGGTCGAT ATGCGAGGCA AGAGAAAAAA TCAGATCCGC
TTAGCTTTCA TTTGCATCAT CTAA
 
Protein sequence
MQDVQVLPWY LRLEWISHTQ HLNMPLQQGS RLISGFDEVR PTTGARGYGR TVSGPSYAQA 
VKFDLRYPGQ VFDEETGLSY NLHRYYDAAT GRYMQADPIG LEDGWNRFGY VANNPLNDVD
PQGLHPLLTR MQGLYYRYGW QGAVNPGTPS KLQLRQAPED KQVQDTIPVD MRGKRKNQIR
LAFICII