| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3711 |
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| Symbol | |
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| ID | 5749294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4077325 |
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| End bp | 4078839 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298810 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001564728 |
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| Protein GI | 160899146 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0129081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCTTCGAGCT TGAGACCCTG AAGATCCGCA TGGGAGATAC CGACCTGCGC
CAGCTGGACC TTCACCAGCG GGTGCAGCGC GCCATGCGTG CGCTGATCCT GGATGGGGCG
CTGCTGCCGG GCCTGAAACT GCCGGCCACG CGCTCGCTGG CCGACTCGCT GGGCATTGCC
CGCGACACGG TGGAGAACGC CTACACCCAG CTGCACCGCG ACGGCTTCAT CGTGCGGCGC
CAGGGATCGG GCAGCTATGT CTCCGAGACC ATCGGCACCG AGCTGCGGGG CCGGGCGGCG
CGGCGCGGCC GCTCGCCCGA GCACGAGCGC AGCGCCCAGG TGGCCGCAGC GGGCAGGGCC
GGTGCCGGCC TGAGCCGGCG CGGCCAGGCC ATTGTTGACG GCGGAGGCAT CGCCGACCAG
CAGACCATTC GGGCCTTTGC CACCGGCCTG CCCGAGACGC GCACCTTTCC CACCGATGTC
TGGGAGCGGC TGCAGCGGCA GGCGCTCAAG GACTACCGCG CCAGCGTCCT GCTGCACGGC
GACCCGCAGG GCGCCGAGCC GCTGCGCAAG GCCATAGCCA CCTACCTCAA CCTGGAGCGT
GGCGCCAAGG TGGACGCCGG GCAGATCGTG GTGCTCAGCA GCACGCGGCA GGCGCTGTTC
CTGTGCGCCC AGCTGCTGGT GGATGCGGGC CGGCCCATCC TGCTGGAGAA CCCGGGCTAC
TTCGGCGCCC GCAAGGCCTT CGAGTCGGCC GAGGCCAAGG TCCTGCCCAT CGACGTGGAC
GCGCAAGGCA TACGCACGGA CCTGCTGCAC GCCGACCGCA GCGGCGCCAC CTGCGTCTAT
GTCACGCCGT CGCACCAGTA CCCCACGGGC GTCACCATGC AGCTGGAGCG GCGGCTGGAC
CTGATCCGCT GGGCCTTCGA GAGCGGGCGC TGGATTATCG AGGACGACTA CGACAGCGAA
TTCCACTACG ACGGCATGCC CACCGCCTGC GTGCAAGGCC TGGACAAGCA CGCGCGCACC
ATCTACATCG GCACCTTCGG CAAGACCCTG TACCCGGGCC TGCGCATGGG CTACATGGCT
TTGCCGCAGG AGCTGGTGCG CGCCTTTGTC CAGGCGCGCA GCATCATGGA CGGGCACACG
CCCCAGATCC AGCAGCTGAC GCTGGCGCGC TTCATGGAAG ACGGCCACTA CAACTCCCAC
GTGCGGGCCA TGCGCAAGCT GTACGCGGGG CGGCGCGAGG TCATCCTCGA ATCCATAGGC
AGGCACTTGG CCGGCATCGT CACCGCGCCA CGGCCCCAGG GCGGCATGCA GGTGCCCTGC
CTGCTGGAGC CCGGCTGGTC CGAGGAAGAC ACCATCCGCC GCGCCGCCGC GGCCGGCGTG
CTGCTGCAGG GGCTCAGCCG CCTGTACGCG GGCGAGCAGC GGCAGCCGGG CTGGCTGCTG
GGCTATGCCT CGCTCACGGC CTACGAGATC GAGGCCGCCG TGCTGCGCCT GGCCAACGCG
CTGCGAAAAC CCTGA
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| Protein sequence | MSKTFELETL KIRMGDTDLR QLDLHQRVQR AMRALILDGA LLPGLKLPAT RSLADSLGIA
RDTVENAYTQ LHRDGFIVRR QGSGSYVSET IGTELRGRAA RRGRSPEHER SAQVAAAGRA
GAGLSRRGQA IVDGGGIADQ QTIRAFATGL PETRTFPTDV WERLQRQALK DYRASVLLHG
DPQGAEPLRK AIATYLNLER GAKVDAGQIV VLSSTRQALF LCAQLLVDAG RPILLENPGY
FGARKAFESA EAKVLPIDVD AQGIRTDLLH ADRSGATCVY VTPSHQYPTG VTMQLERRLD
LIRWAFESGR WIIEDDYDSE FHYDGMPTAC VQGLDKHART IYIGTFGKTL YPGLRMGYMA
LPQELVRAFV QARSIMDGHT PQIQQLTLAR FMEDGHYNSH VRAMRKLYAG RREVILESIG
RHLAGIVTAP RPQGGMQVPC LLEPGWSEED TIRRAAAAGV LLQGLSRLYA GEQRQPGWLL
GYASLTAYEI EAAVLRLANA LRKP
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