Gene Daci_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3687 
Symbol 
ID5749270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4052623 
End bp4053168 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID641298786 
Productpeptidase 
Protein accessionYP_001564704 
Protein GI160899122 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.075913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.111826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG CCCCGTTCGC ACGCACCGCC GCCCTCTCCA TCGCCCTGGC ACTGACCTGC 
GCCACTGCCG CCCTGCCCGC CGCCGCCAAG TCGGTGGCCG AATGGCAGAC CATCACCAGC
CAGGCCAAGA TCCCGCTGGA GCAGGCCGTC ACCCGCGCCA CCCAGGCCGT GCCCGGCAAG
GCCATCGAAG CCCAGCTGGA CGACGGCGAC GGCATGGGCC TGCGCTACGA AATCGAAGTC
ATCACCCCGG GCGGAGACAG CGTGGAAGTC TGGGTCAACG CCATCACCGG CCAAGCCGCC
CAGCACAAGA ACGACGGCGC CGCCAAGCGC AAGGACCGCC AGCGCCTGGA AAAGGCCAAG
TCCACCATCG AACAGGCCAT ACAGGCCGCC ACCCGCCACA CCCCGGGCAC ACCTGTCAGC
GCGGAACTGG ACTCCCACTG GGGCCAGACC AGCTACCAGG TCGAAGTGCT GCAGGCCAAC
GGCACGCTCA TGGAAGTCAA GATCGACGCC GTGGGCGGCG AAGTCATCCG GGCCAAGAAG
GACTGA
 
Protein sequence
MKPAPFARTA ALSIALALTC ATAALPAAAK SVAEWQTITS QAKIPLEQAV TRATQAVPGK 
AIEAQLDDGD GMGLRYEIEV ITPGGDSVEV WVNAITGQAA QHKNDGAAKR KDRQRLEKAK
STIEQAIQAA TRHTPGTPVS AELDSHWGQT SYQVEVLQAN GTLMEVKIDA VGGEVIRAKK
D