Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3687 |
Symbol | |
ID | 5749270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4052623 |
End bp | 4053168 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298786 |
Product | peptidase |
Protein accession | YP_001564704 |
Protein GI | 160899122 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.075913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.111826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCTG CCCCGTTCGC ACGCACCGCC GCCCTCTCCA TCGCCCTGGC ACTGACCTGC GCCACTGCCG CCCTGCCCGC CGCCGCCAAG TCGGTGGCCG AATGGCAGAC CATCACCAGC CAGGCCAAGA TCCCGCTGGA GCAGGCCGTC ACCCGCGCCA CCCAGGCCGT GCCCGGCAAG GCCATCGAAG CCCAGCTGGA CGACGGCGAC GGCATGGGCC TGCGCTACGA AATCGAAGTC ATCACCCCGG GCGGAGACAG CGTGGAAGTC TGGGTCAACG CCATCACCGG CCAAGCCGCC CAGCACAAGA ACGACGGCGC CGCCAAGCGC AAGGACCGCC AGCGCCTGGA AAAGGCCAAG TCCACCATCG AACAGGCCAT ACAGGCCGCC ACCCGCCACA CCCCGGGCAC ACCTGTCAGC GCGGAACTGG ACTCCCACTG GGGCCAGACC AGCTACCAGG TCGAAGTGCT GCAGGCCAAC GGCACGCTCA TGGAAGTCAA GATCGACGCC GTGGGCGGCG AAGTCATCCG GGCCAAGAAG GACTGA
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Protein sequence | MKPAPFARTA ALSIALALTC ATAALPAAAK SVAEWQTITS QAKIPLEQAV TRATQAVPGK AIEAQLDDGD GMGLRYEIEV ITPGGDSVEV WVNAITGQAA QHKNDGAAKR KDRQRLEKAK STIEQAIQAA TRHTPGTPVS AELDSHWGQT SYQVEVLQAN GTLMEVKIDA VGGEVIRAKK D
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