| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3680 |
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| Symbol | |
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| ID | 5749263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4041985 |
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| End bp | 4043085 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641298779 |
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| Product | porin |
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| Protein accession | YP_001564697 |
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| Protein GI | 160899115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.218397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0162344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAT TCTTCGCCTC TTCTTCCAGC TTGGCCTTGG CGCAATCTTC CGTCACCATT
TTTGGTGTGG TGGACGTCGG TGTCACCATT GCCAAGTCCG GCAGCAACAG GCTCAATGCA
CTGAACTCCA GCCAAGGCAA GACCAGCTTG CTTGGCTTGC GCGGCACGGA GGACCTCGGC
GGCGGCAACC GAGCTCAGCT CTGGCTTGAA GGCGGCCTCA ACCCCGATGT CGGCACTGGC
GGCAGCAGCG GCTCCCTTGG CTTCGAGCGC CGCTCCACGA TCGGGCTGAG CAACAATTCC
TGGGGTGAAA TCCGGCTGGG TCGCGACTAC ACCCCCAGCT ACAACATCTT CACCGCTTTC
GCGGGCCCCG ACACCACCAC CGGTGTGCAG GCCAATCTGT TCCAGACGAT CCGCCAGACT
GCCTATAACG CCGCCAGCCA AAGCGGCGTG GTCGACCGCA CGCGCATCAG CAACGCCGTG
GGCTACTTCC TGCCGAGCGA CCTGGGCGGT ATCTATGGCC AGTTCTCGGT TTCCTTTGGC
GACGAGAACG CCTCCGGCTC TGGCGCAAGC AAGGCCCGCA GGTACATAGG CGGCAACCTG
GGCTATCGCT CCGGCCCGCT GAACGTGGGT ATCGGCTACG GCCGGATCGA CGGTACCGCA
GCCGTGGCTT CGCCCAGCGC CATCGCCGCA ACTAGCGATC TGGAAGACCT GGTGCTGGGC
GCCTCGTACA ACTTCGGCAG TTTCCTGCTC AATGGCGGAT ACAACAGCCT GAAGTGGGAG
CCCGTCAACG GCGCAACCTC CGGGAAGGTG GACGGTTTCT ACCTGGGCGC AACCATCCCC
ATGGGGCCAG GCAGCTTGCG CGTCAAGTAC GCCAGCGCCA AGTTCAGCGG CAACGCCTCT
GCCCTCACGC GCAGCGGCGG CAAGGCCGAC AAGTATTCGA TCGGATATGT CTACGAGTTC
TCCAAGCGCA CCTCTCTGTA CGCAGGGCTG GCGCGTGTGA ACAACAAGAA CGGCGCCAGC
GTCGGCCTGA TCGGCGGCCC TGCGGGTGTG GCCAACGCCG GCTCGACCGG TGTGGATCTG
GGTATCAGCC ACTCGTTCTG A
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| Protein sequence | MGTFFASSSS LALAQSSVTI FGVVDVGVTI AKSGSNRLNA LNSSQGKTSL LGLRGTEDLG
GGNRAQLWLE GGLNPDVGTG GSSGSLGFER RSTIGLSNNS WGEIRLGRDY TPSYNIFTAF
AGPDTTTGVQ ANLFQTIRQT AYNAASQSGV VDRTRISNAV GYFLPSDLGG IYGQFSVSFG
DENASGSGAS KARRYIGGNL GYRSGPLNVG IGYGRIDGTA AVASPSAIAA TSDLEDLVLG
ASYNFGSFLL NGGYNSLKWE PVNGATSGKV DGFYLGATIP MGPGSLRVKY ASAKFSGNAS
ALTRSGGKAD KYSIGYVYEF SKRTSLYAGL ARVNNKNGAS VGLIGGPAGV ANAGSTGVDL
GISHSF
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