Gene Daci_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3674 
Symbol 
ID5749257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4034505 
End bp4034900 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID641298773 
Productcupin 2 domain-containing protein 
Protein accessionYP_001564691 
Protein GI160899109 
COG category[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.206207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.126063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCT ATTTGATCCG CGAACAAGAC GTGCCCGGCT ACAGCCCCGC CAACCACCAC 
GGCACCGTCA ACCGGCGCCT GGTCAGCGCC GCCAACGTGG GCGCGCGCCA CATGGAGCTG
GTACTGGGCA CGCTGGAGCA GGGCGGCGGC GCGCTGCCCC ATGCCCACCC CGGCATGGAG
CAGGCCTGCT ACCTGCTGGC CGGAACGGCC GAAGTGGAAA TCGACACCCC GGACGGCAAG
GAACGCTTTG CCATGCAGCC CGGCGACACC TGCTTCTTCC CCGAGGACTG CATGCACATC
TTCCGCGTGA CCAGCGCCGA GCCCGTGCGC CTGCTGGTCT TCTACAGCCC GCCGTACGGC
GAGAACCCCG AGCGCGTGCG CCGACCGGCA GCCTGA
 
Protein sequence
MPRYLIREQD VPGYSPANHH GTVNRRLVSA ANVGARHMEL VLGTLEQGGG ALPHAHPGME 
QACYLLAGTA EVEIDTPDGK ERFAMQPGDT CFFPEDCMHI FRVTSAEPVR LLVFYSPPYG
ENPERVRRPA A