Gene Daci_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3672 
Symbol 
ID5749255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4032104 
End bp4033087 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID641298771 
Producthypothetical protein 
Protein accessionYP_001564689 
Protein GI160899107 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.423242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0951882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT CCCCGTTGCG CAGGGCCCTG GCCCTTGGCG CTATCAGCAC CATTGCGGCC 
GTGGCCGCGC CCTGCGTGTC GGCGCAGGGT GGTTACCCCT CCAATCCCAT CACCCTGGTC
GTGCCGTTCG CGGCCGGCAG CGGCACGGAC GCCGTGGCGC GGCTGGTGGC CACCCGGCTG
GGTGAGCGGC TCAAGCAGCC CGTGATCGTG GACAACAAGG CCGGCGCCAA TGCCCAGATT
GCCGCCAACC ATGTGGCCAA GGCCAAGCCG GACGGCTACA CGCTGTTCAT GACCACCAAC
ACCTCGCACT CGGCCAACCC CTGGCTGGTC AAGGGCCTGA AGTACGACCC CGTCAAGGAC
TTCACACCTG TGGCGCGCGT GGGCGAGCTG CCGTTCGCGC TGCTGGTCCA CCCCTCCGTT
CCTGCCAAGA CCGTGCAGGA ACTCATCGAC TACGCCAAGG CCAATCCCGA CCGCCTGTCC
TACGGCACGC CCAACAGCAC CTCGCTGGTC GCCTCGGAAA CCTTCAAGTA CGTCACGCAC
ACCCAGATCA CCTCGGTGCC CTACAAGTCC AGCCCGCAGG CGCTGACCGA CCTCATGGGC
AACCAGATCC AGGTCTACGT GGCCGATCTG GGCTCGGCCT GGGGCACGAT CAAGACCGAC
CGCGTGCGCA CCCTGGCCGT CACGGCGGCC AAGGGCTCCA CCCTGCTGCC CAATGTGCCG
GCCATCGGCA AGACGCTGCC GGGCTTCGAC ATCACGTCGT GGAACGGCAT CTTCGGCCCG
GCCGGCATGC CCGCCGAGAT CACCGAGCGG CTGAACACCG AGCTGCAGGC CATCCTCAAG
GACAAGGCCG TGCAGGAGCA ATTGGCCCAG GTCGGCTTCG AGGTCTGGCC CACGGCCACG
CCTGCCGAGT TCGCCACCTA TGTGAAGGAC CAGATGGCCC GCTGGGGACA ACTGGTCAAG
CAGGCGGGCA TCGAGGCGCA GTGA
 
Protein sequence
MKHSPLRRAL ALGAISTIAA VAAPCVSAQG GYPSNPITLV VPFAAGSGTD AVARLVATRL 
GERLKQPVIV DNKAGANAQI AANHVAKAKP DGYTLFMTTN TSHSANPWLV KGLKYDPVKD
FTPVARVGEL PFALLVHPSV PAKTVQELID YAKANPDRLS YGTPNSTSLV ASETFKYVTH
TQITSVPYKS SPQALTDLMG NQIQVYVADL GSAWGTIKTD RVRTLAVTAA KGSTLLPNVP
AIGKTLPGFD ITSWNGIFGP AGMPAEITER LNTELQAILK DKAVQEQLAQ VGFEVWPTAT
PAEFATYVKD QMARWGQLVK QAGIEAQ