Gene Daci_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3659 
Symbol 
ID5749242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4018675 
End bp4019217 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID641298758 
Producthypothetical protein 
Protein accessionYP_001564676 
Protein GI160899094 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.470617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.162663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAAGA TGACGAAGCC TTCGACACCC CTCCACACAT CCCTTTCCCG CCGCGCGCTG 
CAGCGGTTGC TCATGGCCGC CTGCCTGGCT GGCGCCGCCG TATCGGCAGG CGCACAGCCC
CAGGGCAGCC CCCAGATGAA TCTGCGCCGC GTGGAGTTGA CGGCCGGGTT CCACCGCATC
GATGCCCAGG TGGCCGCCTC GGACCGCGAG CGCGCCATCG GCCTGATGTT CCGCCAGGAC
ATGCCCGCGC AGGAGGGCAT GATCTTCGTC TTCGAGGTGC CCGCCGTGCA GTGCTTCTGG
ATGCGCAACA CCCTGCTGCC GCTGACCGCC GCCTTCGTGG CCGATGACGG CACCATCGTG
AACCTGGCCG ACATGAAGCC CATGACCGAG GACTCGCACT GCTCGGCCAA GCCCGTGCGC
TATGTGCTGG AGATGAACCA GGGCTGGTTC GCCAAGCGCG GCATCCAGGC CGGAACCAAG
CTGAGCGGCA ACCTGTTCAC CCCAGCCCCA AAACCGGCAC CGGCAACCGC CCCCAAGCCA
TAA
 
Protein sequence
MCKMTKPSTP LHTSLSRRAL QRLLMAACLA GAAVSAGAQP QGSPQMNLRR VELTAGFHRI 
DAQVAASDRE RAIGLMFRQD MPAQEGMIFV FEVPAVQCFW MRNTLLPLTA AFVADDGTIV
NLADMKPMTE DSHCSAKPVR YVLEMNQGWF AKRGIQAGTK LSGNLFTPAP KPAPATAPKP