Gene Daci_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3655 
Symbol 
ID5749238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4013902 
End bp4014393 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID641298754 
ProductMarR family transcriptional regulator 
Protein accessionYP_001564672 
Protein GI160899090 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00553213 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.217217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG AACAGAAATA CCAGGCCCTG CTGGCCGAGG CCGAGCGCCG CAAGCTGGAC 
GACGTGGACA GCATGCGGCT GTGCTTCCAG ACCCTGTCCC TGGCTGCGCG CATCGACCGT
GACTGCGCCG CACTGCTGGC GCCCCATGGC CTGTCCGAAG GGCGCTTCGT GCTGCTGTTC
CTGCTGGAAT CCGCCAGCGA AGGGCTGGCG CCCAACCACC TGGCCGAGCA GGCCGGCATC
ACCCGCGCCA CCGTGACCGG CCTGCTGGAC GGCCTGGAAC GCGAGGCCCT GGCCGAGCGC
CTGCCTGACC CGGCCGACCG CCGCGCGCTG CGCGTGCAGC TCACCGCCAA GGGCCGCCAG
CTGGCGCGCA AGCTGTTTGC CCGGCACAGC CAATGGATCG CCGGCCTGTT TTCCAACCTG
TCGCCCGCCG AACGCGGCCA GTTGGGAAAG CTGCTGGCCA AGGCCGCCGC AGGCGTGGAG
GCCAGCGCAT GA
 
Protein sequence
MQLEQKYQAL LAEAERRKLD DVDSMRLCFQ TLSLAARIDR DCAALLAPHG LSEGRFVLLF 
LLESASEGLA PNHLAEQAGI TRATVTGLLD GLEREALAER LPDPADRRAL RVQLTAKGRQ
LARKLFARHS QWIAGLFSNL SPAERGQLGK LLAKAAAGVE ASA