Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3655 |
Symbol | |
ID | 5749238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4013902 |
End bp | 4014393 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298754 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001564672 |
Protein GI | 160899090 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00553213 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.217217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCG AACAGAAATA CCAGGCCCTG CTGGCCGAGG CCGAGCGCCG CAAGCTGGAC GACGTGGACA GCATGCGGCT GTGCTTCCAG ACCCTGTCCC TGGCTGCGCG CATCGACCGT GACTGCGCCG CACTGCTGGC GCCCCATGGC CTGTCCGAAG GGCGCTTCGT GCTGCTGTTC CTGCTGGAAT CCGCCAGCGA AGGGCTGGCG CCCAACCACC TGGCCGAGCA GGCCGGCATC ACCCGCGCCA CCGTGACCGG CCTGCTGGAC GGCCTGGAAC GCGAGGCCCT GGCCGAGCGC CTGCCTGACC CGGCCGACCG CCGCGCGCTG CGCGTGCAGC TCACCGCCAA GGGCCGCCAG CTGGCGCGCA AGCTGTTTGC CCGGCACAGC CAATGGATCG CCGGCCTGTT TTCCAACCTG TCGCCCGCCG AACGCGGCCA GTTGGGAAAG CTGCTGGCCA AGGCCGCCGC AGGCGTGGAG GCCAGCGCAT GA
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Protein sequence | MQLEQKYQAL LAEAERRKLD DVDSMRLCFQ TLSLAARIDR DCAALLAPHG LSEGRFVLLF LLESASEGLA PNHLAEQAGI TRATVTGLLD GLEREALAER LPDPADRRAL RVQLTAKGRQ LARKLFARHS QWIAGLFSNL SPAERGQLGK LLAKAAAGVE ASA
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