Gene Daci_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3654 
Symbol 
ID5749237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4013120 
End bp4013905 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID641298753 
Producthypothetical protein 
Protein accessionYP_001564671 
Protein GI160899089 
COG category[L] Replication, recombination and repair 
COG ID[COG4335] DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.114436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.232025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC CCGCCCCCCG GCGCAAGGGC GCCAACCGCA CGGCCGATAT CACTCCCGAA 
CTGCTGCAGG CCCTGTCCCT GGGCGAGATC GAGACCGCCA CGCTGACCGA AAGCCTGGCC
GTGGACCAGG CCCGGCTGCT GCAGGCCGTC TTTCCCGACG CGTGGCCGCA ACTGGAGGAC
ACGGCGCAGG CGCTGGGCCA GCTTGGCATT CTCAAGCGCA TGGAGTCCAT TGGCGGCCTG
CTGTGGCAGG CGCTGGGCCA GGCCGGCTGG CAGCGCTGCC TCACGCACCG CTCTGACACG
GTGCGCGGCT GGGCCTGCTT CATGGCCGGT GCGCAGCCGG GCCTGACCCT GAGCCAGCGC
CTGGAGCTGC TGCAGCCGCT GGCCGATGAC TCGCATTTCG GCGTGCGCGA ATGGTCGTGG
ATGGGCGTGC GCCCGCATCT GGCCAGCGAT CTGCCGCAGG CCGTGGCCGA GTTGTCCCGG
TGGACAAGGC GGACCTCCGA CCGCCTGCGC CGCTTCGCCA GCGAGGCCCT GCGGCCGCGC
GGCGTCTGGT GCAGCCATAT CGCGGCGCTC AAGCAGCAGC CGGAGATCGC CCTGCCCCTT
TTGCAGCGGC TGCGCGCCGA TGCCTCGCCC TATGTGCAGG ACTCGGTGGC CAACTGGCTC
AACGACGCGG CCAAGAGCCG GCCCGACTGG GTGCGCGCCC TGTGCGCGCA ATGGCTCGAG
GAATCGCCCG TGCCCGCCAC GCGCCGCATC TGCGAGCGTG CGCAGCGCAG CCTCAAGGAG
AGCTAG
 
Protein sequence
MTAPAPRRKG ANRTADITPE LLQALSLGEI ETATLTESLA VDQARLLQAV FPDAWPQLED 
TAQALGQLGI LKRMESIGGL LWQALGQAGW QRCLTHRSDT VRGWACFMAG AQPGLTLSQR
LELLQPLADD SHFGVREWSW MGVRPHLASD LPQAVAELSR WTRRTSDRLR RFASEALRPR
GVWCSHIAAL KQQPEIALPL LQRLRADASP YVQDSVANWL NDAAKSRPDW VRALCAQWLE
ESPVPATRRI CERAQRSLKE S