Gene Daci_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3653 
Symbol 
ID5749236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4012684 
End bp4013133 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID641298752 
Productferric uptake regulator family protein 
Protein accessionYP_001564670 
Protein GI160899088 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.188238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.295199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CCGCTGACCT CAAGAACCTG GGGCTGAAGG CCACGCTGGC GCGACTGTGG 
GTACTGGACA TCTTTCGCCA CGGGGACCAG CGGCATCTGG CGGCGGAGGA GGTCTACCGC
CAGCTGCATG ACCAGGGCCG GGGCACCAGC CTGGCCACGG TCTACCGCGT GCTGGCGCAG
CTGGAGCAGG CCGGCATGCT GCGCCAGCAG CGCTTTGCGG CGGGCAAGGC GGTCTATGAA
CTCGACGACG GCGAGCACCA TGACCACCTG ATCTGCACGC GCTGCGGCCT GGTGCAGGAG
TTCCACGATG CCGTGATCGA ACAGCGCCAG AAGCTGCTGG CGCGCTCGCA TGGCTTTGCC
ATCGTGGAGC ACTCGCACAT CCTCTACGGG CGCTGCATCC AGCCCGACTG CGAGCGGCTG
GCGGGCCGGC AGGAGGCTAG CTCTCCTTGA
 
Protein sequence
MSDSADLKNL GLKATLARLW VLDIFRHGDQ RHLAAEEVYR QLHDQGRGTS LATVYRVLAQ 
LEQAGMLRQQ RFAAGKAVYE LDDGEHHDHL ICTRCGLVQE FHDAVIEQRQ KLLARSHGFA
IVEHSHILYG RCIQPDCERL AGRQEASSP