| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3650 |
|---|
| Symbol | |
|---|
| ID | 5749233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4011024 |
|---|
| End bp | 4011914 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298749 |
|---|
| Product | putative GTP cyclohydrolase |
|---|
| Protein accession | YP_001564667 |
|---|
| Protein GI | 160899085 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1469] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0777432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.310808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCAC CTCTTCCCGA TGTTTCCCTG ACCGATCCCG CGCCCAGCCT CAGCCCGCTG
CAATGGGTGG GCATGCAGGG CATAGACCTG CCCGTGACCG TGGCCGAGCC CGGCTACTGG
CGCGAGCTGC ATGCGCGCGC CGATGTGCAG GTCGATCTTC CTGCGGCCCA TGTCAAGGGC
ATACACATGT CCCGGCTGTA CCGGCAACTG GACAGCCTGG CCGAGGAATC CGCGCTGTCT
GCCCTGGCGC TGCGCCATGC GCTGCAGGCC ATGATCGACA GCCACCTCGA CTGCCAAAGC
CGCAGCGCCC GAATGCGCCT GTCGCTGGAC CTGCTGGCCC AGCGGCCCGC CCTGGTCACC
CACGATCTGT CGGGCTGGAA GTCCTATCCC GTGCGCCTGG ACGCCACGCT GGCGCAGGGC
GTGTTCCAGC TGCGGCTGCA GGTGGGCGTG GGCTATTCCT CGACCTGCCC CTGCTCGGCG
GCACTGTCGC GCCAGTTGCT GGAGCAGGGC TTTTTGCAGG CCTTTGCGGG CGAGCCCCTG
GTGGAGCCGG ACCAGGTGGC TTCCTGGCTG CGCCGGCACG GCACGCTGGC CACGGCACAC
AGCCAGCGCA GCGAGGCCCA GGTCAGCGTG GACTTGGCCT GTGATGCGCC GGACCTCGGC
ATCCTGCCCC TGATCGCCCG CGTGGAGCAG GCGCTGGGCA CGCCCGTGCA GACCGCCGTC
AAGCGCGCCG ACGAGCAGGC CTTTGCCGCG CTCAACGGCC GCAACCTGAT GTTTGTCGAG
GATGCGGCGC GCCGCATACA GGCCGCGCTG GAAGGCATCT ACGCCCGGCC GCGCGTGCAT
GTGCGCCACA TGGAGAGCCT GCATCCGCAC GATGCCGTGG CCTGGGCATG A
|
|---|
| Protein sequence | MLAPLPDVSL TDPAPSLSPL QWVGMQGIDL PVTVAEPGYW RELHARADVQ VDLPAAHVKG
IHMSRLYRQL DSLAEESALS ALALRHALQA MIDSHLDCQS RSARMRLSLD LLAQRPALVT
HDLSGWKSYP VRLDATLAQG VFQLRLQVGV GYSSTCPCSA ALSRQLLEQG FLQAFAGEPL
VEPDQVASWL RRHGTLATAH SQRSEAQVSV DLACDAPDLG ILPLIARVEQ ALGTPVQTAV
KRADEQAFAA LNGRNLMFVE DAARRIQAAL EGIYARPRVH VRHMESLHPH DAVAWA
|
|---|
| |