Gene Daci_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3649 
Symbol 
ID5749232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4009657 
End bp4010928 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID641298748 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001564666 
Protein GI160899084 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0493761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.568925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGC AGTGCCCGCC GCGTGCTCCC TGTCCCTGTT CGAGAGATTC CATGATGCAT 
ACCGTAGCGC CGGTTCAGCC GCCGCATGCC CGATTGCCTG TGACCGTGCT GTCGGGCTTT
CTGGGCGCAG GCAAGACCAC CTTGCTCAAC CACATCCTGC ACAACCGCGA AGGGCGGCGC
GTGGCCGTCA TCGTCAATGA CATGTCCGAG GTCAATATCG ACGCGGCCCT GGTGCGCGAT
GGCGGCGCCG GCCTGTCGCG CACCGACGAA AAGCTGGTGG AGATGAGCAA TGGCTGCATC
TGCTGCACGC TGCGCGAGGA CCTGCTGCTG GAGGTGGCGC GGCTGGCGGG CGAGGGCCGC
TTCGACCAGC TGGTCATCGA GTCAACGGGC ATCTCCGAGC CGCTGCCGGT GGCCGAGACC
TTCACCTTCG CTGGCGAGGA CGGACGCAGC CTGGGCGATG TGGCGCGGCT GGACACCATG
GTAACCGTGG TCGATGCCTT CAACTTCCTG CACGACTATG GCTCGCGTGA CAGCCTGCGC
TCGCGCGGCG AATCGCTGGG CGAGGAGGAC CGCCGCACTG TGGTCGATCT GCTGATCGAG
CAGGTGGAGT TCTGCGATGT GATCGTGCTC AACAAGATCG ACCTGGTCAC CGATGAGGAC
TGCAGCCGGC TCATGGCCAT CCTGCGCGGG CTCAACCCGC GTGCCAGGCT GGAGGCCGCC
TCCTTCGGCC AGCTGCCGCT GGATCGCGTG CTCGATACCG GGCTGTTCGA TTTCGAGGAG
GCCTCCAGGG CGCCGGGCTG GCTGCAGCAG TTGCGTGGCA CGCACCAGCC CGAGACCGAG
GCCTATGGCG TTGCCAGCTT TGTCTACCGC GCCCGCCGCC CCTTTCATCC CCGGCGCTTC
TTCGGCCTGG TGCAAAGCGA ATGGCCGGGA GTGGTGCGCT CCAAGGGATT TTTCTGGCTG
GCCAGCCATC CGGCGCTGGC CGGCTCCTGG TCCCAGGCCG GCGCCGTGGC CCGCCATGGC
CCGGCCGGCC ACTGGTGGGC CGCCGTAGAG GCCGAGCGCT GGCCGCGCGA CCCCGAGAGC
GTGGAGCGCA TCCTGGACAA ATGGGTCGAT GGCGTGGGCG ACGCGCGCCA GGAACTGGTG
CTGATCGGCA TGGGCATGGA CGAGCAGGCG CTGCGCGCAC GCCTGGACGA ATGCCTGCTG
ACCGATGCGG AAATGGCCAT GGGCCCGCAG GCCTGGACGC AGTGGGACAA CCCCTTTCCC
GGATGGAACT GA
 
Protein sequence
MRPQCPPRAP CPCSRDSMMH TVAPVQPPHA RLPVTVLSGF LGAGKTTLLN HILHNREGRR 
VAVIVNDMSE VNIDAALVRD GGAGLSRTDE KLVEMSNGCI CCTLREDLLL EVARLAGEGR
FDQLVIESTG ISEPLPVAET FTFAGEDGRS LGDVARLDTM VTVVDAFNFL HDYGSRDSLR
SRGESLGEED RRTVVDLLIE QVEFCDVIVL NKIDLVTDED CSRLMAILRG LNPRARLEAA
SFGQLPLDRV LDTGLFDFEE ASRAPGWLQQ LRGTHQPETE AYGVASFVYR ARRPFHPRRF
FGLVQSEWPG VVRSKGFFWL ASHPALAGSW SQAGAVARHG PAGHWWAAVE AERWPRDPES
VERILDKWVD GVGDARQELV LIGMGMDEQA LRARLDECLL TDAEMAMGPQ AWTQWDNPFP
GWN