| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3645 |
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| Symbol | |
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| ID | 5749228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4005831 |
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| End bp | 4008065 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641298744 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001564662 |
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| Protein GI | 160899080 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000734043 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.208006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC AGCAACCCAC CATCATCTAC ACCCTGACCG ATGAGGCTCC GCGCCTTGCC
ACCAGTGCCT TCCTGCCTGT GGTGCGCGCC TTTGCCGCAC CCGCCGGCGT GAATGTCGAG
ACCGCCGACA TCTCCGTGGC CCACCGCATC CTGGGTGAGT TCTCCGAATT CCTGGCCGAA
GACCAGCGCG TGGCCCACAC CTTGTCCGAG CTCGGCAAGA AGACGCTGGA GCCCGATGTC
AACATCATCA AGCTGCCCAA CATCAGCGCC TCCGTGGCCC AGCTGACGGC TGCCATCAAG
GAGCTGCAGG GCAAGGGCTA CGCACTGCCC GACTACCCCG AGAATCCGAC CAACGACCAG
GAAAAGGACA TCAAGGCACG CTACGGCAAG TGCCTGGGCT CGGCCGTGAA CCCCGTGCTG
CGCGAGGGCA ACTCCGACCG CCGCGCTCCT GCCGCCGTCA AGAACTACGC CAAGAAGCAC
CCCCACTCCA TGGGCGAGTG GAAGCAGTGG TCGCAAACCC ATGTCTCGCA CATGGAGCAC
GGCGACTTCT ACCACGGCGA AAAGTCCATG ACCCTGGACA AGGCCCGCGA CGTCAAGATG
GAGCTGACCA CCAAGAGCGG CAAGACCGTG GTGCTCAAGC CCAAGGTCGC GCTGCAGGCC
GGCGAGATCA TCGACTCCAT GTTCATGAGC AAGAAGGCGC TGTGCGACTT CTACGAAAAG
GAACTGGACG ACTGCCGCGA CGCCGGCATC CTGTTCTCGC TGCACGTCAA GGCCACGATG
ATGAAGGTCT CGCACCCCAT CGTGTTCGGC CACTGCGTGA GGATCTACTA CAAGGAAGCC
TTCGAGAAGC ACGGCAAGCT GTTCGACGAG CTGGGCGTGA ACGTCAACAA CGGCATGTCC
ACGCTGTACG AGAAAATCGA GACGCTGCCC GCCTCGCTGC GCGAAGAGAT CATCCGTGAC
CTGCACGCCT GCCAGGAACA CCGTCCCGCG CTGGCCATGG TGGACTCGGC CAAGGGCATC
ACCAACTTCC ACTCGCCCAA CGACGTGATC GTTGACGCGT CCATGCCCGC CATGATCCGC
CAGGGCGGCA AGATGTGGGG CGCCGACGGC AAGCCCTACG ACTGCAAGGC CGTGATGCCT
GAGTCCACCT TTGCCCGCAT CTATCAGGAG ATGATCAACT TCTGCAAGTG GCACGGCAAC
TTCGACCCCA AGACCATGGG CACCGTGCCC AACGTGGGCC TGATGGCGCA AAAGGCCGAA
GAGTACGGCT CGCACGACAA GACCTTCGAG ATCGAGGAAG ACGGCGTTGC CAACATCGTC
GATCTGGCCA CCGGCGAAGT GCTGATGAGC CAGAACGTGG AGCAGGGCGA CATCTGGCGC
ATGTGCCAGG TCAAGGACGC TCCCATCCGC GACTGGGTCA AGCTGGCCGT CACGCGTGCC
CGCAACTCCG GCATGCCTGC CGTGTTCTGG CTGGACCCCT ATCGTCCGCA CGAGGCCGAG
CTGATCAAGA AGGTCAACAC CTACCTGAAG GACTACGACA CCACGGGCCT GGAAATCCAC
ATCCTGTCTC AGGTCCGCGC CATGCGCTAC ACGCTGGAGC GCGTGGCCCG CGGCCTGGAC
ACCATCTCGG TGACCGGCAA CATCCTGCGC GACTACCTGA CCGACCTGTT CCCCATCATG
GAACTGGGCA CCTCAGCCAA GATGCTGTCC ATCGTGCCCC TGATGGCCGG TGGCGGCATG
TACGAAACGG GTGCTGGCGG CTCGGCTCCC AAGCACGTGC AGCAGCTGGT GGAAGAAAAC
CACCTGCGCT GGGATTCGCT GGGCGAGTTC CTGGCACTGG CCGTGTCGCT TGAAGACCTG
GGCATCAAGA ACGACAACGC CCGCGCCAAG CTGCTGGCCA AGACCCTGGA TGAAGCCACG
GGCAAGCTGC TGGACGAAGA CAAGTCGCCT TCGCGCCGCA CCGGCGAGCT GGACAACCGT
GGCAGCCAGT TCTACATCGC CCTGTATTGG GCACAGGCCC TGGCGGCGCA GACGGAAGAT
GCCGAACTGG CCTCCAAGTT CGCTTCGCTG GCCAAGCAAC TGGCCGACAA CGAGTCCAAG
ATCATCGAAG AGCTGCGCAC CGTGCAGGGC AAGGCCGTGG ACATCGGTGG CTACTACATG
CCCGACGTGG CCAAGATGGA TGCCGTGATG CGCCCCAGCG CCACGTTCAA CGCAGCCATC
GACGCGCTGC TGTAA
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| Protein sequence | MSTQQPTIIY TLTDEAPRLA TSAFLPVVRA FAAPAGVNVE TADISVAHRI LGEFSEFLAE
DQRVAHTLSE LGKKTLEPDV NIIKLPNISA SVAQLTAAIK ELQGKGYALP DYPENPTNDQ
EKDIKARYGK CLGSAVNPVL REGNSDRRAP AAVKNYAKKH PHSMGEWKQW SQTHVSHMEH
GDFYHGEKSM TLDKARDVKM ELTTKSGKTV VLKPKVALQA GEIIDSMFMS KKALCDFYEK
ELDDCRDAGI LFSLHVKATM MKVSHPIVFG HCVRIYYKEA FEKHGKLFDE LGVNVNNGMS
TLYEKIETLP ASLREEIIRD LHACQEHRPA LAMVDSAKGI TNFHSPNDVI VDASMPAMIR
QGGKMWGADG KPYDCKAVMP ESTFARIYQE MINFCKWHGN FDPKTMGTVP NVGLMAQKAE
EYGSHDKTFE IEEDGVANIV DLATGEVLMS QNVEQGDIWR MCQVKDAPIR DWVKLAVTRA
RNSGMPAVFW LDPYRPHEAE LIKKVNTYLK DYDTTGLEIH ILSQVRAMRY TLERVARGLD
TISVTGNILR DYLTDLFPIM ELGTSAKMLS IVPLMAGGGM YETGAGGSAP KHVQQLVEEN
HLRWDSLGEF LALAVSLEDL GIKNDNARAK LLAKTLDEAT GKLLDEDKSP SRRTGELDNR
GSQFYIALYW AQALAAQTED AELASKFASL AKQLADNESK IIEELRTVQG KAVDIGGYYM
PDVAKMDAVM RPSATFNAAI DALL
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