Gene Daci_3637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3637 
Symbol 
ID5749220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3995482 
End bp3996171 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID641298736 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001564654 
Protein GI160899072 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0573839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0644959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCCG CCCCGAACAA GGACGCAGGC AGCGCTGCCA CAGGCCGGCC GCTGCTGGAA 
AGAAAACCGC TGCTGCGTGC CACCTCGCCC CAACTGAAGG AACTGCGCCA GCTGCGCATT
GCCGTCGTCC ACCCCGACGA CGCGGACGGC CGCCTGCTGG CCCAGCAGCT GCAGCGCATA
GGCTGCCAGG TCCAGGCCAT CTGGCCGCCC CAGCCCAGCC TGCCCGAGGG TACGGACGTG
GTCTTCCTGG CCGTGCGCCC CGATCACCTG CAGTTGAACT ACGCCTGGAC CCAGGGCGAG
GGGGAGAGCC CGCCCACCGC CATCGCCGTG GTCAACTACG AGAACCCCAC CATCGTCTCC
GCCGTGCTGG AACTGCAGGT GCAGGCCATC CTGCCCTCGC CCATCCGCTC CTTCGGCCTG
CTGTCCACAT TGGTGCTGGC GCGCAGAAAC CACAAGGAAT CACGCCAGCA GCAGCAGCGC
ATCGCCAAGC TCCAGGCCAA GCTGCTGGGC CAGCGCCGCG TGGCCGAAGC CAAGGCCATC
CTCATGCAAA CCCACCAGAT CAACGAAGAC CAGGCCTACG AAATGATCCG CGCCCAGGCC
ATGAGCCGGC GAAGCTCGGT GGAGGAGATT GCCCAGGCCA TCGTGCATGC GAGCGAAATA
CTGTCGCTGG GCAAGGGCGT GGGCAGGTAA
 
Protein sequence
MDAAPNKDAG SAATGRPLLE RKPLLRATSP QLKELRQLRI AVVHPDDADG RLLAQQLQRI 
GCQVQAIWPP QPSLPEGTDV VFLAVRPDHL QLNYAWTQGE GESPPTAIAV VNYENPTIVS
AVLELQVQAI LPSPIRSFGL LSTLVLARRN HKESRQQQQR IAKLQAKLLG QRRVAEAKAI
LMQTHQINED QAYEMIRAQA MSRRSSVEEI AQAIVHASEI LSLGKGVGR