Gene Daci_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3623 
Symbol 
ID5749207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3986531 
End bp3986956 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID641298724 
Productputative TIS1421-transposase orfA protein 
Protein accessionYP_001564642 
Protein GI160899060 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.111162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0945006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG CCCTCATGGC AAGACGACCC GTTAGCAAAG AACTGTGGCG ACAGCTACAA 
CCCCTGATCC CAGCCTTCGT GCCTTCTGCC AAAGGCGGTG CGCGCAAACT CGCAGTCAGC
GATGAAGCTG CCCTCAACGG CATCTTGTTC GTGCTGCAAA CAGGCATTCC ATGGGAAGAC
CTTCCCCAAT CCCTGGGCTA CGGCAGCGGC ATGACTTGCT GGCGGCGTCT GCGCGACTGG
AATGCCGCTG GTGTCTGGGA GCAGCTGCAC CAAGCCATGC TGACTCGCTT GCGTGAACAT
GACCAAATCG ATTGGAGCCG GGCCAGCATT GATGGCTCCT CGGTACCAAG CCCCCGGGGG
GCCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCCAAG CGGCACATCG
TCGTAG
 
Protein sequence
MLAALMARRP VSKELWRQLQ PLIPAFVPSA KGGARKLAVS DEAALNGILF VLQTGIPWED 
LPQSLGYGSG MTCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG
ARKRAQTPRT EASSAPSGTS S