Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3623 |
Symbol | |
ID | 5749207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3986531 |
End bp | 3986956 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641298724 |
Product | putative TIS1421-transposase orfA protein |
Protein accession | YP_001564642 |
Protein GI | 160899060 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.111162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0945006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTG CCCTCATGGC AAGACGACCC GTTAGCAAAG AACTGTGGCG ACAGCTACAA CCCCTGATCC CAGCCTTCGT GCCTTCTGCC AAAGGCGGTG CGCGCAAACT CGCAGTCAGC GATGAAGCTG CCCTCAACGG CATCTTGTTC GTGCTGCAAA CAGGCATTCC ATGGGAAGAC CTTCCCCAAT CCCTGGGCTA CGGCAGCGGC ATGACTTGCT GGCGGCGTCT GCGCGACTGG AATGCCGCTG GTGTCTGGGA GCAGCTGCAC CAAGCCATGC TGACTCGCTT GCGTGAACAT GACCAAATCG ATTGGAGCCG GGCCAGCATT GATGGCTCCT CGGTACCAAG CCCCCGGGGG GCCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCCAAG CGGCACATCG TCGTAG
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Protein sequence | MLAALMARRP VSKELWRQLQ PLIPAFVPSA KGGARKLAVS DEAALNGILF VLQTGIPWED LPQSLGYGSG MTCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG ARKRAQTPRT EASSAPSGTS S
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