| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3614 |
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| Symbol | |
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| ID | 5749198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3975965 |
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| End bp | 3977125 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298715 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001564633 |
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| Protein GI | 160899051 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.718454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0448181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA CCCTGCAACT GACCGAGCAG CTGATCAGCC TGCCCTCCGT CACTCCCGAA
GACGCCGGCT GCCTCGAACT CCTGGCCGAT GCCCTGCAGC CCATGGGCTT TGCCTGCGAG
CGCATCGACA GCGGCCCCGA CAGCTTTCGC GTGCGCAACC TCTGGGCCCG GCGCTCCGGG
ACAGGCGCCG ACCGGCCCGT GCTGGTCTTT GCCGGCCATA CCGACGTAGT GCCCACCGGC
CCGCTGGAGC AGTGGAGCAG CCCGCCCTTC GTGCCCACGC ACCGCGACGG CAAGCTGTAC
GGCCGCGGCG CCAGCGACAT GAAGACCTCC ATCGCCGCCT TCGTCGTGGC ACTGGAGGAA
TTCCTGGCCG AGACACCGGC CCCCTCCTTC GACATTGCCC TGCTGCTGAC CAGCGACGAG
GAAGGCCCCT CGGTGGACGG CACCAAGGTC GTGGTCGAGC TGCTGCGCGA GCGCGGCGAG
CGCCTGGACT GGTGCATCGT CGGCGAGCCC ACCTCGGTGG AGCGCACGGG CGACATGATC
AAGAACGGCC GCCGGGGCAC CATGAGCGGG CGCCTCACGG TCAAGGGCAT CCAGGGCCAC
ATCGCCTACC CGCAGCTCGC GCGCAACCCC ATCCACCAGG CCCTGCCGGC CCTGGCCGAA
CTGGCCGCCA CGCGCTGGGA CGAGGGCAAT GCCTTCTTCC CGCCCACCAG CTGGCAGATC
AGCAACATGC ATGGCGGCAC GGGCGCATCC AACGTCATCC CCGGCCATGT GACCATCGAC
TTCAACTTCC GCTTCTGCAC CGAGTCCACG GCCGAATCGC TGCAGCAGCG CGTGCACGCC
GTGCTGGACC ACCACGGGCT GGAGTACGAG CTGGCCTGGA CCATTGGCGG CCAGCCCTTC
CTGACCACGC CGGGCACGCT GGTGAACGCC GTGCAGGCCG CCATCCGCGC CGAGACCGGC
CTGGAGACCG AGCTGTCCAC CACGGGCGGC ACCAGCGACG GCCGCTTCAT CGCCCAGATC
TGCAGCCAGG TCGTGGAGGT GGGCCCGTCC AACGCCAGCA TCCACAAGAT CGACGAGCAC
ATCGTGGTGG CCGACATCGA GCCCATCAAG AACATTTACC GCCGCACGCT CCAGGAGCTG
CAGCGACAGC AGGCCGTCTG A
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| Protein sequence | MSRTLQLTEQ LISLPSVTPE DAGCLELLAD ALQPMGFACE RIDSGPDSFR VRNLWARRSG
TGADRPVLVF AGHTDVVPTG PLEQWSSPPF VPTHRDGKLY GRGASDMKTS IAAFVVALEE
FLAETPAPSF DIALLLTSDE EGPSVDGTKV VVELLRERGE RLDWCIVGEP TSVERTGDMI
KNGRRGTMSG RLTVKGIQGH IAYPQLARNP IHQALPALAE LAATRWDEGN AFFPPTSWQI
SNMHGGTGAS NVIPGHVTID FNFRFCTEST AESLQQRVHA VLDHHGLEYE LAWTIGGQPF
LTTPGTLVNA VQAAIRAETG LETELSTTGG TSDGRFIAQI CSQVVEVGPS NASIHKIDEH
IVVADIEPIK NIYRRTLQEL QRQQAV
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