| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3611 |
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| Symbol | |
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| ID | 5749195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3972193 |
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| End bp | 3973791 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298712 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001564630 |
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| Protein GI | 160899048 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0778531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0346233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAGA CATCCCGGCC CACCGCAGGC CACCCCCATT CCCACTCCCT TCCCATCCCC
AATGTCGGCG AACTGGTCGC GCGCAGTTGC AGGGCCCACG GCGCGCAGCC GGCCGTGACC
AGCGCCGCGC GCAGCATCAG CTACGCCGAG CTGGAGCAGC GCTCCAACCG CCTGGCGAAC
GCCCTGCTTG CCCAGGGCCT GGCCCGTGGC GACCGCGTGG GCATCTACCT GCCCAACTGC
GTGGAAATCG TGGAGATCGA GATCGCCTGC TACAAGGCCG GGCTCATCAA GGCGCCCTTC
AACGCACGCC TTTCGCCGCG CGAAGTGGGC GATATCGCGG CCAACAGCGA TGCCGCCGTC
ATCGTGACCA CCGCAGCGCG CGCCGAGGCC TTCAAGCCGC ACCTGCAGTC CGCCGACGTG
CGCCTGCTGC TGCTGGACGG CCCCGCCGGC GAAAGCTACG AGGCCCTGCT CGCCCGCGCC
AGCGACCGCT TCCAGCCCGT GGCCGTGCAC GAGCACGAGG TGGCCGTGCT GCACTACACC
TCGGGCTCCT CGGGCGTGCT CAAGGCCGCC ATGCAGACCT TCGGCAACCG CCTGGCCCAG
CTGCGCAAAT TCCTGATGCG CGGCGAGGGC ATGCAGGCCG GCCACGTGCT GGGACTGGTC
GGTCCGGTCA CGCACGCCTC GGGCATGCAG ATGGTGCCGG CGCTGTGCAC GGGCGCCACC
ATCCACCTGT TCTCGGGCTT CGAGCCGGGC GCCTTCATGG CCGAGATGCA GGCGCGGCGC
GTCACCCATA CCTTCATGGT GCCCACCATG ATCAACATGC TGCTGGCCGA GATCGGCGGC
CGCTACCGCC CCCTGCCCGA CCTGCTGCGC CTGGGCTACG GCGCAGCGCC CATGGCGCCG
GCGCGCATCC TGCAGGCCAT GGACGTGTTC GGCCCCATCC TGTCCCAGGG CTATGGCGCG
GGCGAGACCA CCTCCGGCGT CTGCGGCCTG AGCGTGCAGG ACCACCTGCA GGCGCGCGCA
TCGCGCCCAG AGCGGCTGGC TTCCTGCGGC CGGCCCTTCC TGGAATCCCT GGTCGAGGTG
CTGGACGACG AGGGCCGCCC GGTGCCCGAG GGCGAGATCG GCGAGATCGT GGTCAGCGGC
GCCGATGTCT TTGCAGGCTA CTGGCGCGCG CCCGAGCTGA CGGCCGAGGT GCTCAGGAAC
GGCCGCTACC ACACGGGCGA TCTGGCCCGC ATGGACGAGC AGGGCTTTGT CTACATCGTG
GACCGCAAGA AGGACATGGT CATCAGCGGA GGCTTCAACG TCTATCCGTC CGAGGTGGAG
TCCGTGCTCT ACGAACACGC CTCGGTGGCC GATGCCTGCG TGTTCGCCAT CCCCGACGAC
AAATGGGGCG AGGCCGTGGC CGCCCACATC GTGCTCAAGC CCGGCCTGGC CGGCGACAGT
GCCGCGCTGG ACCGCTTTTG CGCCGAGCGC CTGGGCGGCT TCAAGCGCCC GCGCCACATC
GAATTCGTGC AGCAGCTGCC CAAGAACCCC AACGGCAAGG TCATGCGCCG CGCCGTGCAG
GCGCCCTACT GGGCCAACCA CGCCCGCAAG GTAAACTGA
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| Protein sequence | MHETSRPTAG HPHSHSLPIP NVGELVARSC RAHGAQPAVT SAARSISYAE LEQRSNRLAN
ALLAQGLARG DRVGIYLPNC VEIVEIEIAC YKAGLIKAPF NARLSPREVG DIAANSDAAV
IVTTAARAEA FKPHLQSADV RLLLLDGPAG ESYEALLARA SDRFQPVAVH EHEVAVLHYT
SGSSGVLKAA MQTFGNRLAQ LRKFLMRGEG MQAGHVLGLV GPVTHASGMQ MVPALCTGAT
IHLFSGFEPG AFMAEMQARR VTHTFMVPTM INMLLAEIGG RYRPLPDLLR LGYGAAPMAP
ARILQAMDVF GPILSQGYGA GETTSGVCGL SVQDHLQARA SRPERLASCG RPFLESLVEV
LDDEGRPVPE GEIGEIVVSG ADVFAGYWRA PELTAEVLRN GRYHTGDLAR MDEQGFVYIV
DRKKDMVISG GFNVYPSEVE SVLYEHASVA DACVFAIPDD KWGEAVAAHI VLKPGLAGDS
AALDRFCAER LGGFKRPRHI EFVQQLPKNP NGKVMRRAVQ APYWANHARK VN
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