| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3608 |
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| Symbol | |
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| ID | 5749192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3967749 |
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| End bp | 3969812 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298709 |
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| Product | ABC transporter related |
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| Protein accession | YP_001564627 |
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| Protein GI | 160899045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.100909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0123712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCC TTCGCAACAT TACCCTGCGC CGCGGCACCC GCGTGCTGCT GGACAGCACC
TCCGTCTCCA TCAACCCTGG TGAAAAAGTC GGCCTTGTCG GACGCAATGG CGCCGGCAAG
TCCAGCCTGT TCGCCCTGCT CAACGGCAGC CTGGCCGAGG ACGGTGGAGA GTTCTCCATC
CCTTCGCAAT GGCGCCTGGG CCAGGTCGCG CAGAACATGC CAGAGACCTC GGAGACGGCC
ACCCAGTTCG TGCTGGACGG CGACACCCGC CTGAGCGAGC TCAACGCCCA GCTCGCGGCC
GCCGAGGCCA GCGAGGACGG CATGGCCATT GCCCACGCCC ACGTGGACCT GGCCGACGCC
GGCGCGCATG ATGCCGTGCC GCGCGCCCAG GCCCTTATCC TGGGCCTGGG CTTCAAGGTC
TCCGAGCTGG AGCACCCCGT CAACAGCTTC TCCGGCGGCT GGCGCATGCG CCTGCAGCTG
GCGCGCGCGC TGATGTGCCC CTCCGACCTG CTGCTGCTGG ACGAGCCCAC CAACCACTTG
GACCTGGACG CCCTGGTCTG GCTGGAAGCC TGGCTCAAGC GCTACCCCGG CACCCTGGTC
GTGATCAGCC ATGACCGCGA ATTCCTGGAC GCCATCACCA ACACCACGCT GCACATAGAA
AACGCGCAGG TCACGCGCTA TGGCGGCAAC TACAGCAAGT TCGAGGAACT GCGCGCCCAG
CAGATCCTGC TGCAGCAGGC CTCGTTCGAG CGCCAGCAGG ACAAGATCGC CCACCTGCAG
AAATTCATCG ACCGCTTCAA GGCCAAGGCC TCCAAGGCCA AGCAGGCGCA AAGCCGCGTC
AAGCAGATCG AGCGCATGGA AAAGGTCGCA CCCATGCTGG CCAGCGCCGA TTTCACCTTC
GAGTTCAAGC CGCCGGCCAA CCTGCCCAAC CCCATGCTGG CGATCACGGA CGCCGCATTC
GGCTACGTGG ACGACGAAGG CCAGGCGACC ACCATCCTGC GCGGCGTCAA CCGCTCGGTG
CTGGCGGGCC AGCGCATCGG TATCCTGGGC GCCAACGGCC AGGGCAAGTC CACCCTGGTC
AAGACCATTG CGCGCGAGAT GAAGGCGCTG GCCGGCACCG TGACCGAAGG CAAGGGCCTG
AACATCGGCT ACTTCGCCCA GCAGGAACTG GATGTGCTGC GTCCCGGCGA AAACCCCATG
GAGCACATGA TCCGCCTGGC ACGGGACACC GGCGCCACCG GCCCGCAGGC CCGCGAGCAG
GACCTGCGCA GCTACCTGGG CACGTTCAAC TTCAGCGGCG ACATGGTCAA GCAGGCCGTG
GGCAGCATGA GCGGCGGCGA AAAGGCCCGC CTGGTGCTGG CCATGATCGT CTGGCAGCGC
CCCAACCTGC TGCTGCTGGA CGAGCCCACC AACCACCTGG ACCTGGCCAC GCGCGAGGCC
CTGGCCATGG CGATCAACGA CTTCGACGGC ACCGTCATGC TGGTCAGCCA CGACCGCGCG
CTGCTGCGCT CGGTCTGCGA GGACTTCTGG CTGGTCGGCC GTGGCGTGGT CGGCCCCTTC
GACGGCGACC TGGACGACTA CCAGCGCTAC CTGCTGGAAG AATCCCGCCG CCTGCGCGAG
GAAGCCCGCA AGGCCGAACA GGCGGCTGCG GCCACCAGCA AGGCGGCAGC GCAGGTGGAG
CCCGCAGCAC ATGCAGCACC TGCAGTGCAG GCCCCCGTGG CTGCTGCGCT GGCCCCGGCC
CCCGCTGCCC CGTCCACGCC CCCGGCCGCC AGTGCCGGAG ACCAGCGCGA GCAACGGCGC
CTGGCCGCCC TGGCCCGCCA GCAGATGGCC GAAAAGACCC GGCCGTTCAA GAAGGAACTG
GAACAGCTGG ACAAGCGCCT GCCCCAGCTG CAGGCCGAGC GCACGCGGCT CGAAGGCCTG
CTGAGCCAGC CCATCTCGCC CGCCGACATG GCCGAGACGG GCCGCAGCCT CAAGGCCTGC
AACGACGAGA TAGACAGCCT GGAAGAGCGC TGGCTGGAAC TGAGCGAGCA GATCGAGCAG
CTGTCGGCCG CGATTTCCGA CTGA
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| Protein sequence | MISLRNITLR RGTRVLLDST SVSINPGEKV GLVGRNGAGK SSLFALLNGS LAEDGGEFSI
PSQWRLGQVA QNMPETSETA TQFVLDGDTR LSELNAQLAA AEASEDGMAI AHAHVDLADA
GAHDAVPRAQ ALILGLGFKV SELEHPVNSF SGGWRMRLQL ARALMCPSDL LLLDEPTNHL
DLDALVWLEA WLKRYPGTLV VISHDREFLD AITNTTLHIE NAQVTRYGGN YSKFEELRAQ
QILLQQASFE RQQDKIAHLQ KFIDRFKAKA SKAKQAQSRV KQIERMEKVA PMLASADFTF
EFKPPANLPN PMLAITDAAF GYVDDEGQAT TILRGVNRSV LAGQRIGILG ANGQGKSTLV
KTIAREMKAL AGTVTEGKGL NIGYFAQQEL DVLRPGENPM EHMIRLARDT GATGPQAREQ
DLRSYLGTFN FSGDMVKQAV GSMSGGEKAR LVLAMIVWQR PNLLLLDEPT NHLDLATREA
LAMAINDFDG TVMLVSHDRA LLRSVCEDFW LVGRGVVGPF DGDLDDYQRY LLEESRRLRE
EARKAEQAAA ATSKAAAQVE PAAHAAPAVQ APVAAALAPA PAAPSTPPAA SAGDQREQRR
LAALARQQMA EKTRPFKKEL EQLDKRLPQL QAERTRLEGL LSQPISPADM AETGRSLKAC
NDEIDSLEER WLELSEQIEQ LSAAISD
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